HHsearch alignment for GI: 254780317 and conserved domain: PRK04173
>PRK04173 glycyl-tRNA synthetase; Provisional.
Probab=95.25 E-value=0.12 Score=32.98 Aligned_cols=143 Identities=22% Similarity=0.280 Sum_probs=80.7
Q ss_pred CCCCCCCCCCHHH----HHHH--HCCCEEEEEECCCCCCCCCCCC----CCCCCCCCCEEE-ECCCC---CHHHHHHHHH
Q ss_conf 6322446763055----5543--0363122541057647454421----378100200578-61786---6899988999
Q gi|254780317|r 177 HKLLRTHTSPVQI----RVME--SQDLPIKVIVPGKTYRRDSDST----HSPMFHQIEGLV-VSDSA---TIANLRWVLE 242 (366)
Q Consensus 177 ~~lLRthTS~vQi----R~m~--~~~pP~~~~~~GrvyR~d~D~t----H~~~FhQ~egl~-v~~~i---~~~~lk~~l~ 242 (366)
T Consensus 162 ~~YLRPETAQGiFvnFk~v~~~~r~KlPFgiaQIGKaFRNEIsPr~~lfR~REFeQmEiE~F~~P~~~~e~~~yw~~~~~ 241 (460)
T PRK04173 162 LGYLRPETAQGIFVNFKNVLRTARKKLPFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDEEWFAYWIALRK 241 (460)
T ss_pred CEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 02316044104566119999971778880431004001243065545122345555243310586745899999999999
Q ss_pred HHHHHHCCCCCCEEEEEECCCCCCCC----CCEEEEEEECCCCEEEECCCCCEEEEECCCCC---CHH-HHHHCCCC---
Q ss_conf 99999708886626454238898526----61036787505880422468834898457563---888-99856988---
Q gi|254780317|r 243 SFCKSFFEVSSLQMRFRPSFFPFTEP----SFEVDVRCSFSDGIIKFDEGTEWMEILGCGMV---DPR-VLRGVGID--- 311 (366)
Q Consensus 243 ~~~~~~fg~~~~~~r~rp~~fPfteP----s~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~---~p~-vl~~~g~d--- 311 (366)
T Consensus 242 ~fl~~-lGi~~~~lR~r~h--~~~elAHYa~~~~D~E~~~---------~~Gw~E~~Gia~RtdyDL~~H~~~Sg~~L~~ 309 (460)
T PRK04173 242 NFLLD-LGIDPENLRFREH--LPEELAHYSKATWDIEYKF---------PFGWGELEGIANRTDYDLSRHSKHSGEDLSY 309 (460)
T ss_pred HHHHH-CCCCHHHEEEEEC--CCHHHCCCCHHHEEEEEEC---------CCCEEEEEEECCCCHHHHHHHHHHCCCCEEE
T ss_conf 99998-3998899478630--6134200022005589945---------8982887664064210278898744887179
Q ss_pred -----CCCE--EEEEEECCHHHHHHHH
Q ss_conf -----0003--7996313446997997
Q gi|254780317|r 312 -----PDIY--QGFAWGMGLDRIAMLK 331 (366)
Q Consensus 312 -----~~~~--~g~AfG~G~eRlaml~ 331 (366)
T Consensus 310 ~d~~~~~k~iPhVIEpS~GvdR~~la~ 336 (460)
T PRK04173 310 FDQETGEKYIPYVIEPSFGLDRLFLAF 336 (460)
T ss_pred EECCCCCEECCEEEEECCCCCHHHHHH
T ss_conf 822558561340564046710899999