HHsearch alignment for GI: 254780317 and conserved domain: PRK12420

>PRK12420 histidyl-tRNA synthetase; Provisional.
Probab=97.61  E-value=0.0012  Score=47.67  Aligned_cols=112  Identities=14%  Similarity=0.165  Sum_probs=78.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             23899999999999987398762372341588988861898877331633127750566655632244676305555430
Q gi|254780317|r  115 IHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMES  194 (366)
Q Consensus       115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~  194 (366)
T Consensus        18 ~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~----~elf~~~~g~~~~i~kemy~f~D~-~gr~l~LRPe~Ta~iaR~~a~   92 (421)
T PRK12420         18 QVLRNKIKRACEDTFERYGCKPLETPTLNM----YELMSYKYGGGDEILKEIYTLQDQ-GKRDLALRYDLTIPFAKVVAM   92 (421)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCCH----HHHHCCCCCCCCHHHHHEEEEECC-CCCEEEECCCCCHHHHHHHHH
T ss_conf             999999999999999985994724765011----876424478844224110788818-998798567765899999997


Q ss_pred             C---CCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCC
Q ss_conf             3---63122541057647454-4213781002005786178
Q gi|254780317|r  195 Q---DLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDS  231 (366)
Q Consensus       195 ~---~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~  231 (366)
T Consensus        93 ~~~~~~P~k~~y~g~vfR~erpq~GR~ReF~Q~GvEiiG~~  133 (421)
T PRK12420         93 NPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVE  133 (421)
T ss_pred             CCCCCCCEEEEEECCEEECCCCCCCCCCEEEECCEEEECCC
T ss_conf             75777874588876778538987885551343575420788