HHsearch alignment for GI: 254780317 and conserved domain: PRK12420
>PRK12420 histidyl-tRNA synthetase; Provisional.
Probab=97.61 E-value=0.0012 Score=47.67 Aligned_cols=112 Identities=14% Similarity=0.165 Sum_probs=78.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 23899999999999987398762372341588988861898877331633127750566655632244676305555430
Q gi|254780317|r 115 IHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMES 194 (366)
Q Consensus 115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~ 194 (366)
T Consensus 18 ~~~~~~i~~~~~~~~~~~Gy~~I~tP~~E~----~elf~~~~g~~~~i~kemy~f~D~-~gr~l~LRPe~Ta~iaR~~a~ 92 (421)
T PRK12420 18 QVLRNKIKRACEDTFERYGCKPLETPTLNM----YELMSYKYGGGDEILKEIYTLQDQ-GKRDLALRYDLTIPFAKVVAM 92 (421)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCH----HHHHCCCCCCCCHHHHHEEEEECC-CCCEEEECCCCCHHHHHHHHH
T ss_conf 999999999999999985994724765011----876424478844224110788818-998798567765899999997
Q ss_pred C---CCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCC
Q ss_conf 3---63122541057647454-4213781002005786178
Q gi|254780317|r 195 Q---DLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDS 231 (366)
Q Consensus 195 ~---~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~ 231 (366)
T Consensus 93 ~~~~~~P~k~~y~g~vfR~erpq~GR~ReF~Q~GvEiiG~~ 133 (421)
T PRK12420 93 NPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVE 133 (421)
T ss_pred CCCCCCCEEEEEECCEEECCCCCCCCCCEEEECCEEEECCC
T ss_conf 75777874588876778538987885551343575420788