HHsearch results for GI: 254780317 and protein with PDBid: 1b7y_B
>1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 2iy5_B*
Probab=98.92 E-value=2.5e-08 Score=80.25 Aligned_cols=219 Identities=18% Similarity=0.274 Sum_probs=141.7
Q ss_pred HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-EEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 31000001123212267423899999999999987398-76237234158898886189887733163312775056665
Q gi|254780317|r 97 QSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGF-ALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGG 175 (366)
Q Consensus 97 E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF-~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~ 175 (366)
+.+..++|........+...+..+..+.+++++.++|| ++...+.+..+.... +..+. +..-+.++-..
T Consensus 470 dnIp~~~p~~~~~~~~~~~~~~~~~~~~ir~~L~~~Gf~Evitysf~s~~~~~~--~~~~~--------~~v~l~NPls~ 539 (785)
T 1b7y_B 470 ETIPLALPAFFPAPDNRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARR--FRLDP--------PRLLLLNPLAP 539 (785)
T ss_dssp GGSCCCCCCCCCCGGGSSTTHHHHHHHHHHHHHHHHTCEECCCCSEECTTHHHH--TTCCC--------CSCEESSCSST
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH--HHCCC--------CCEEECCCCCC
T ss_conf 546566765344555667555379999999999868985640477678789655--30255--------22475157750
Q ss_pred CCCCCCCCCCCHHHHHHHH---C--CCEEEEEECCCCCCCCCCCCCC-CCCCCCCEEE--ECCCCCHHHHHHHHHHHHHH
Q ss_conf 5632244676305555430---3--6312254105764745442137-8100200578--61786689998899999999
Q gi|254780317|r 176 KHKLLRTHTSPVQIRVMES---Q--DLPIKVIVPGKTYRRDSDSTHS-PMFHQIEGLV--VSDSATIANLRWVLESFCKS 247 (366)
Q Consensus 176 ~~~lLRthTS~vQiR~m~~---~--~pP~~~~~~GrvyR~d~D~tH~-~~FhQ~egl~--v~~~i~~~~lk~~l~~~~~~ 247 (366)
+...|||.--|.-+.++.. + +..+++|-.|+||+........ .......+.. ......|-++|+.++.++..
T Consensus 540 e~~~lR~sLlp~LL~~~~~N~~~~~~~~~~lFEiG~vf~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~Kg~ve~l~~~ 619 (785)
T 1b7y_B 540 EKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREETHLAGLLFGEGVGLPWAKERLSGYFLLKGYLEALFAR 619 (785)
T ss_dssp TSSEECSCSHHHHHHHHHHHHHHSCCSCEEEEEEEEEESSSEEEEEEEEEESSCBSCSSSSCCBCSHHHHHHHHHHHHHH
T ss_pred CHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 01446311630699999988760787543153025342442033343532034444333323443266789999999875
Q ss_pred HCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHH
Q ss_conf 70888662645423889852661036787505880422468834898457563888998569880003799631344699
Q gi|254780317|r 248 FFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRI 327 (366)
Q Consensus 248 ~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRl 327 (366)
+ | +..++.++-.|+-.|+.-.+|.+ + +. .||-.|.+||+|++..+++ +. ++|-+=++.
T Consensus 620 l-~---~~~~~~~~~~~~~hpgrsa~I~~---~--------~~--~iG~iGelhP~v~~~~~i~-~v---~~~Ei~l~~- 677 (785)
T 1b7y_B 620 L-G---LAFRVEAQAFPFLHPGVSGRVLV---E--------GE--EVGFLGALHPEIAQELELP-PV---HLFELRLPL- 677 (785)
T ss_dssp H-T---CCCEEECCCCTTEEEEEEEEEEE---T--------TE--EEEEEEEECHHHHHHTTCC-CC---EEEEEEESC-
T ss_pred C-C---CCCEEECCCCCCCCCCCEEEEEE---C--------CE--EEEEEEEECHHHHHHCCCC-CE---EEEEEECCC-
T ss_conf 2-7---54214226687778875799999---9--------97--9999999988999876999-77---999980436-
Q ss_pred HHHHCCCCCHHHHHHCCHHHHHHCCCCCC-CCCCCCCCCC
Q ss_conf 79973897058766358888874489844-6884145889
Q gi|254780317|r 328 AMLKYGMPDVREFFGADVRWIEHYGFSPL-DIPPLFSRLA 366 (366)
Q Consensus 328 aml~~gi~diR~~~~~d~rfl~qf~~~~~-~~~~~~~~~~ 366 (366)
. -+...|.|+ .+|.+.||||
T Consensus 678 -------~------------~~~~~~~~~skfP~v~RDls 698 (785)
T 1b7y_B 678 -------P------------DKPLAFQDPSRHPAAFRDLA 698 (785)
T ss_dssp -------C------------CCCCCCCCCCCSCCEEEEEC
T ss_pred -------C------------CCCCCCCCCCCCCCCCEEEE
T ss_conf -------2------------34765798998998427799