HHsearch results for GI: 254780317 and protein with PDBid: 1h4v_B

>1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A
Probab=96.23  E-value=0.036  Score=35.30  Aligned_cols=108  Identities=14%  Similarity=0.229  Sum_probs=72.7

Q ss_pred             CHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHC----CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf             38999999999999873987623723415889888618----98877331633127750566655632244676305555
Q gi|254780317|r  116 HPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALN----FPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRV  191 (366)
Q Consensus       116 HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLN----iP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~  191 (366)
                      .-...+.+.++++|..-||+.++-|-+|.-    |.+.    --.+|++.+|-.   +.+ ..++.+.||.--|+--+|.
T Consensus        18 ~i~~~l~~~i~~~~~~~Gy~~V~TP~ie~~----dl~~~~~~~~~d~~~~~my~---~~D-~~g~~l~Lrpd~t~~~~r~   89 (421)
T 1h4v_B           18 RMHQRIVATARKVLEAAGALELVTPIFEET----QVFEKGVGAATDIVRKEMFT---FQD-RGGRSLTLRPEGTAAMVRA   89 (421)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECCCCSEEEG----GGGCCCSCC------CCSCE---EEC-TTSCEEEECCCSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCEEEECCCCCCH----HHHHCCCCCCCCHHHHHCEE---EEC-CCCCEEEECCCCCHHHHHH
T ss_conf             999999999999999859979889621509----88633468632103664502---466-9998885257674899999


Q ss_pred             HHH-----CCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCC
Q ss_conf             430-----363122541057647454-4213781002005786178
Q gi|254780317|r  192 MES-----QDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDS  231 (366)
Q Consensus       192 m~~-----~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~  231 (366)
                      +..     .+.|+|....|.|||++. ...+..+|.|+..=.++.+
T Consensus        90 ~~~~~~~~~~~p~k~y~~~~v~R~e~~~~g~~r~~~q~~~~i~~~~  135 (421)
T 1h4v_B           90 YLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSE  135 (421)
T ss_dssp             HHHTTGGGSSSSEEEEEEEEEECCCCC----CCEEEEEEEEEESCC
T ss_pred             HHHHHHHHCCCCEEEEEECCEEECCCCCCCCEEEEEECCCEECCCC
T ss_conf             9985654047872699875535316788884145665062112454