HHsearch results for GI: 254780317 and protein with PDBid: 1hc7_A
>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=91.40 E-value=0.88 Score=25.12 Aligned_cols=199 Identities=11% Similarity=0.097 Sum_probs=110.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEECCCEEEC--HHHHHHHHCCCCCCCCCCCCCEEEEECC---CCCCCCCCCCCCCCHHH
Q ss_conf 238999999999999873987623723415--8898886189887733163312775056---66556322446763055
Q gi|254780317|r 115 IHPVTQVIDEVTCIFMDMGFALEEGSDIET--DYYNFAALNFPDDHPARQMHDTFFVPGI---AGGKHKLLRTHTSPVQI 189 (366)
Q Consensus 115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEt--d~~NFdaLNiP~~HPARdmqDTFyl~~~---~~~~~~lLRthTS~vQi 189 (366)
......+.+-+.+.+.+.||+.+.-|-+-. .||. -..|=.----+.|++... ...+...||+.+-+...
T Consensus 44 ~~i~~~i~~~i~~~~~~~G~~ev~~P~li~~~~l~k------~sgh~~~f~~emf~v~~~~~~~~~e~~~LrPt~e~~~~ 117 (477)
T 1hc7_A 44 YAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRK------EAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIG 117 (477)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------------CCTTCEEEEEESSSEEEEEEEECSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH------HHCCHHHCCCCEEEEECCCCHHHCCCCCCCCCCCHHHH
T ss_conf 999999999999999985997998966157899998------86764131756078851684110243146897668899
Q ss_pred HHHHH-----CCCEEEEEECCCCCCCCCC---CCCCCCCCCCCEEEECCCC-----CHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 55430-----3631225410576474544---2137810020057861786-----689998899999999708886626
Q gi|254780317|r 190 RVMES-----QDLPIKVIVPGKTYRRDSD---STHSPMFHQIEGLVVSDSA-----TIANLRWVLESFCKSFFEVSSLQM 256 (366)
Q Consensus 190 R~m~~-----~~pP~~~~~~GrvyR~d~D---~tH~~~FhQ~egl~v~~~i-----~~~~lk~~l~~~~~~~fg~~~~~~ 256 (366)
....+ .+.|+|+.-.|.|||++.- -+..-+|+|-|+-.++.+- .+.........|+..+.- -.+..
T Consensus 118 ~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~gllR~ReF~~~D~ht~~~t~e~a~~~~~~~~~~y~~~~~~~~~-~~~~~ 196 (477)
T 1hc7_A 118 YMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA-IPVIE 196 (477)
T ss_dssp HHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_pred HHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCCEEEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHEEE
T ss_conf 99962355202488888615301000246777534899987512444223888899999999999999764311-11120
Q ss_pred EEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCC---CCC-----CEEEEEEECCHHHHH
Q ss_conf 454238898526610367875058804224688348984575638889985698---800-----037996313446997
Q gi|254780317|r 257 RFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGI---DPD-----IYQGFAWGMGLDRIA 328 (366)
Q Consensus 257 r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~---d~~-----~~~g~AfG~G~eRla 328 (366)
..++..-.|..--...++.+... .+.-++++.+=-+..+--+..++ |.+ .++ --||+| +|+.
T Consensus 197 g~~~~~e~~~ga~~~~~ie~~~~--------~Gr~~q~gt~~~lg~~fs~~f~i~y~d~~g~~~~~~~-~~~Gi~-~R~i 266 (477)
T 1hc7_A 197 GLKTEKEKFAGAVYTTTIEALMK--------DGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHT-TSWGLS-WRFI 266 (477)
T ss_dssp EECCTTTSCTTSSEEEEEEEECT--------TSCEEEEEEEEEEETHHHHHTTCEEECTTSCEEECEE-EEEEEE-THHH
T ss_pred CCCCCCCCCCCCCCCCHHHHHHH--------CCHHHHCCCEEECCCCHHHHCCCEEECCCCCEEEEEE-EECCCC-HHHH
T ss_conf 56545545446343413467664--------4504432733303430456526556435784333566-640441-6789
Q ss_pred HH
Q ss_conf 99
Q gi|254780317|r 329 ML 330 (366)
Q Consensus 329 ml 330 (366)
..
T Consensus 267 ~a 268 (477)
T 1hc7_A 267 GA 268 (477)
T ss_dssp HH
T ss_pred HH
T ss_conf 99