HHsearch results for GI: 254780317 and protein with PDBid: 1ses_A
>1ses_A Seryl-tRNA synthetase; ligase(synthetase); HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=97.76 E-value=0.0041 Score=42.14 Aligned_cols=306 Identities=15% Similarity=0.166 Sum_probs=169.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH---HHHHCC----CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9846899999999999999998506998999999---999808----640689998761589988999999999999999
Q gi|254780317|r 1 MTECNVFEDEVERIRSSLYNSIASVTDMDSLNAI---RVATLG----RKGSISSLLKDLKNLDSQQVSARGAILNQLKVD 73 (366)
Q Consensus 1 Mse~n~m~eeI~~L~~e~~~~I~~a~~~~eLe~l---rv~~LG----KKG~Lt~llK~Lk~Ls~EeKk~~Gk~iNelK~~ 73 (366)
|=+++.+.++.+.+++....+=.+. +++.|.++ +.+... -+..-+.+-|++++...+++.+.-+.+.++|++
T Consensus 1 MlDik~iR~n~e~v~~~l~~R~~~~-dld~ll~Ld~~~r~l~~~~e~l~~~rN~lSK~I~k~k~~~~~~l~~~~~~lk~~ 79 (421)
T 1ses_A 1 MVDLKRLRQEPEVFHRAIREKGVAL-DLEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEE 79 (421)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHTCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHCHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 9897888759999999998659970-689999999999999999999999999999997532515489999999999999
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHCCCCCCC-----------------C---------------------------
Q ss_conf 999999---99999985676667654310000011-----------------2---------------------------
Q gi|254780317|r 74 ISGKIS---ARKDFIRNQLIFEQISSQSVDVSLPV-----------------F--------------------------- 106 (366)
Q Consensus 74 Ie~~i~---~kk~~L~~~~~~~kl~~E~iDVTLP~-----------------~--------------------------- 106 (366)
+.++-+ +..+++....+. +-+ -.+-+.|. +
T Consensus 80 i~~le~~~~~~~~~l~~~ll~--IPN-lp~~~VP~G~de~~n~i~~~~~~~~f~f~~k~H~ei~e~l~~~d~~aakisGs 156 (421)
T 1ses_A 80 AKRLEEALREKEARLEALLLQ--VPL-PPWPGAPVGGEEANREIKRVGGPPEFSFPPLDHVALMEKNGWWEPRISQVSGS 156 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT--CCC-CCCTTSCSSSGGGCEEEEEESCCCCCSSCCCCHHHHHHHHTCBCTTHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999886799998877665302--221-23221112455443302321577533412210688888865434445543241
Q ss_pred CCCCCCCCCCHHH-HHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 3212267423899-999999999987398762372341588988861898877331633127750566655632244676
Q gi|254780317|r 107 SSPCHRGRIHPVT-QVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTS 185 (366)
Q Consensus 107 ~~~~~~G~~HPIt-qvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS 185 (366)
+-.+..|..--+. -.++-..|+..+-||+.+.-|.+-..---+..=..|.. .-|.|.+. .++..|. =||
T Consensus 157 rf~~l~g~~A~LerALi~f~ld~~~~~gy~e~~~P~lv~~~~~~gtG~lp~f-----~~d~y~~~----~~~l~Li-pTa 226 (421)
T 1ses_A 157 RSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAY-----RDQVWAIA----ETDLYLT-GTA 226 (421)
T ss_dssp SCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTT-----GGGSCBBT----TSSEEEC-SST
T ss_pred CHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC-----CCHHHHHH----HHHHHHH-CCC
T ss_conf 1100069557751657899998740000002333145567777503788653-----10234431----1344210-246
Q ss_pred CHHHHHHH------HCCCEEEEEECCCCCCCCC-----CC---CCCCCCCCCCEEEECC---CCC---HHHHHHHHHHHH
Q ss_conf 30555543------0363122541057647454-----42---1378100200578617---866---899988999999
Q gi|254780317|r 186 PVQIRVME------SQDLPIKVIVPGKTYRRDS-----DS---THSPMFHQIEGLVVSD---SAT---IANLRWVLESFC 245 (366)
Q Consensus 186 ~vQiR~m~------~~~pP~~~~~~GrvyR~d~-----D~---tH~~~FhQ~egl~v~~---~i~---~~~lk~~l~~~~ 245 (366)
-|.+=.|- ....|+|+.+.-.|||++. |. -+.|+|+-||.+++-. +-+ +..+....+.++
T Consensus 227 Ev~l~~~~~~~il~~~~LPlr~~~~s~cfR~EaGs~GkdtrGl~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~~~i~ 306 (421)
T 1ses_A 227 EVVLNALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEIL 306 (421)
T ss_dssp HHHHHHTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 63067664155544653573257744753222334452103443310245577778614543024679999999999998
Q ss_pred HHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCC---CCCCEEEEEE--
Q ss_conf 99708886626454238898526610367875058804224688348984575638889985698---8000379963--
Q gi|254780317|r 246 KSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGI---DPDIYQGFAW-- 320 (366)
Q Consensus 246 ~~~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~---d~~~~~g~Af-- 320 (366)
+.+ |.. ..+-.+|+-=-+.--+.-+||..+..+ .+.|+||..|--..--.-+..+| |++.-+.|++
T Consensus 307 ~~L-~lp-yrvv~~~~~dlg~~a~~~~diE~w~P~-------~~~~~Evss~Sn~~d~qsrrl~i~y~~~~~~~~~~htl 377 (421)
T 1ses_A 307 RLL-ELP-YRLVEVATGDMGPGKWRQVDIEVYLPS-------EGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTL 377 (421)
T ss_dssp HHT-TCC-EEEEECCHHHHCTTCSEEEEEEEEETT-------TTEEEEEEEEEEEETHHHHHHTCEEECTTSCEEECEEE
T ss_pred HHC-CCC-CHHHHCCCCCCCHHHHHHCCEEEEECC-------CCCEEEEEEECCCCHHHHHHCCCEEECCCCCEEEEEEC
T ss_conf 622-673-110222755677587632140788648-------89678782120200388876158788899987866872
Q ss_pred ---ECCHHHHHH
Q ss_conf ---134469979
Q gi|254780317|r 321 ---GMGLDRIAM 329 (366)
Q Consensus 321 ---G~G~eRlam 329 (366)
++.+.|+..
T Consensus 378 ngt~~a~~R~l~ 389 (421)
T 1ses_A 378 NNTALATPRILA 389 (421)
T ss_dssp EEEEEEETHHHH
T ss_pred CCCCCHHHHHHH
T ss_conf 476037889999