HHsearch results for GI: 254780317 and protein with PDBid: 3a5y_A
>3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A*
Probab=98.84 E-value=1e-07 Score=75.80 Aligned_cols=123 Identities=16% Similarity=0.123 Sum_probs=77.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHH-HH
Q ss_conf 23899999999999987398762372341588988861898877331633127750566655632244676305555-43
Q gi|254780317|r 115 IHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRV-ME 193 (366)
Q Consensus 115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~-m~ 193 (366)
+=-=++++..|+++|.+-||..++-|-+... .+.. +.=+.--|-|..+.. ..+.-+-=++||=.-.. +.
T Consensus 36 L~~Rs~i~~~iR~ff~~~gF~EV~TPiL~~~--------~~~g-a~~~pf~~~~~~~~~-~~~~~~yL~~SpQl~lq~l~ 105 (345)
T 3a5y_A 36 LLKRAAIMAEIRRFFADRGVLEVETPCMSQA--------TVTD-IHLVPFETRFVGPGH-SQGMNLWLMTSPEYHMKRLL 105 (345)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEECCCCSEESS--------CCCC-TTCCCCEEEECCSTT-SCCEEEEECSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCC--------CCCC-CCCCCEEEEECCCCC-CCCCCEEECCCHHHHHHHHH
T ss_conf 9999999999999998889789879864788--------9876-456616887236666-67857775548799999999
Q ss_pred HCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf 0363122541057647454-42137810020057861786689998899999999708
Q gi|254780317|r 194 SQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFE 250 (366)
Q Consensus 194 ~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg 250 (366)
.... -||+.+|+|||.+. ++.|.++|.|+|.-++.. ++.++...++.+++.++.
T Consensus 106 ~~g~-~rVf~I~p~FR~E~~~~~H~~EFtmlE~e~a~~--d~~dlm~~~E~li~~v~~ 160 (345)
T 3a5y_A 106 VAGC-GPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHY--DMYRLMNEVDDLLQQVLD 160 (345)
T ss_dssp HTTC-CSEEEEEEEECCCCCBTTBCSEEEEEEEEEETC--CHHHHHHHHHHHHHHHHC
T ss_pred HCCC-CCCEEEECCCCCCCCCCCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHH
T ss_conf 6799-872798345326998988576345534432479--999999999999999987