HHsearch results for GI: 254780317 and protein with PDBid: 3ica_A

>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, beta subunit, structural genomics, PSI-2, protein structure initiative; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=98.85  E-value=8.3e-08  Score=76.47  Aligned_cols=186  Identities=13%  Similarity=0.143  Sum_probs=125.3

Q ss_pred             CHHHHHHHHHHHHHHHCCC-EEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             3899999999999987398-762372341588988861898877331633127750566655632244676305555430
Q gi|254780317|r  116 HPVTQVIDEVTCIFMDMGF-ALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMES  194 (366)
Q Consensus       116 HPItqvi~eI~~IF~~lGF-~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~  194 (366)
                      ..-.++.+.|++.+.++|| ++...+.+-.+++  +.++.   .|.   .+..-+.++-..+..+|||.--|.-++++..
T Consensus         4 d~~~~~~~~ir~~L~~~Gf~Ev~tys~~~~~~~--~~~~~---~~~---~~~v~l~NPls~d~~~lR~sLlpgLL~~~~~   75 (213)
T 3ica_A            4 DRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYY--EGLKS---HPR---EMAVELMNPLSQELNCMRQTLLFGGLETLSH   75 (213)
T ss_dssp             HHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGG--TTCSS---SCG---GGCCBCSSBSCSSEEEECSSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH--HHHCC---CCC---CCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             576899999999999789630012767898999--87417---875---6707952886566899988768649999876


Q ss_pred             C----CCEEEEEECCCCCCCCC----CCCCCCCCCC---CCEEEEC-----------CCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             3----63122541057647454----4213781002---0057861-----------78668999889999999970888
Q gi|254780317|r  195 Q----DLPIKVIVPGKTYRRDS----DSTHSPMFHQ---IEGLVVS-----------DSATIANLRWVLESFCKSFFEVS  252 (366)
Q Consensus       195 ~----~pP~~~~~~GrvyR~d~----D~tH~~~FhQ---~egl~v~-----------~~i~~~~lk~~l~~~~~~~fg~~  252 (366)
                      +    ..++++|-+|+||+.+.    |.+...-+.|   +-+++.+           +.++|-++||.++.++..+ |.+
T Consensus        76 N~~~~~~~~~lFEiG~vf~~~~~~~~~~~~~~~~~e~~~l~~~~~G~~~~~~w~~~~~~~df~~~Kgive~ll~~l-gi~  154 (213)
T 3ica_A           76 NLRRKHLSLYLFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRV-GIE  154 (213)
T ss_dssp             HHTTTCSEEEEEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHT-TCC
T ss_pred             HHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCC
T ss_conf             6653466635897411661477765432101002035189999988865666565433005999999999999982-998


Q ss_pred             CCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHH
Q ss_conf             662645423889852661036787505880422468834898457563888998569880003799631344699
Q gi|254780317|r  253 SLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRI  327 (366)
Q Consensus       253 ~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRl  327 (366)
                      ......+++.-+|- |+--.++.           .  +.-+||-+|.+||++++..||+.++   ++|-+-+|-|
T Consensus       155 ~~~~~~~~~~~~~~-~~~~a~i~-----------~--~~~~iG~~G~l~p~i~~~~~i~~~v---~~~Ei~ld~L  212 (213)
T 3ica_A          155 TGAYTLKTADNDLY-ASAMEVKT-----------R--SGKLLGTFGTVSTELIKRFEIEQPV---YFAELLWDAL  212 (213)
T ss_dssp             GGGEEEEECCCTTE-EEEEEEEE-----------T--TCCEEEEEEEECHHHHHHTTCCSCE---EEEEEEHHHH
T ss_pred             CCCCCCCCCCCCCC-CCCEEEEE-----------E--CCCEEEEEEEECHHHHHHCCCCCCE---EEEEEEHHHH
T ss_conf             32130225564335-66236887-----------7--8959999999889999874979987---9999997993