HHsearch results for GI: 254780317 and protein with PDBid: 3ica_A
>3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, beta subunit, structural genomics, PSI-2, protein structure initiative; HET: TAM; 2.44A {Porphyromonas gingivalis}
Probab=98.85 E-value=8.3e-08 Score=76.47 Aligned_cols=186 Identities=13% Similarity=0.143 Sum_probs=125.3
Q ss_pred CHHHHHHHHHHHHHHHCCC-EEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 3899999999999987398-762372341588988861898877331633127750566655632244676305555430
Q gi|254780317|r 116 HPVTQVIDEVTCIFMDMGF-ALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMES 194 (366)
Q Consensus 116 HPItqvi~eI~~IF~~lGF-~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~ 194 (366)
..-.++.+.|++.+.++|| ++...+.+-.+++ +.++. .|. .+..-+.++-..+..+|||.--|.-++++..
T Consensus 4 d~~~~~~~~ir~~L~~~Gf~Ev~tys~~~~~~~--~~~~~---~~~---~~~v~l~NPls~d~~~lR~sLlpgLL~~~~~ 75 (213)
T 3ica_A 4 DRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYY--EGLKS---HPR---EMAVELMNPLSQELNCMRQTLLFGGLETLSH 75 (213)
T ss_dssp HHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGG--TTCSS---SCG---GGCCBCSSBSCSSEEEECSSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH--HHHCC---CCC---CCEEEECCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 576899999999999789630012767898999--87417---875---6707952886566899988768649999876
Q ss_pred C----CCEEEEEECCCCCCCCC----CCCCCCCCCC---CCEEEEC-----------CCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 3----63122541057647454----4213781002---0057861-----------78668999889999999970888
Q gi|254780317|r 195 Q----DLPIKVIVPGKTYRRDS----DSTHSPMFHQ---IEGLVVS-----------DSATIANLRWVLESFCKSFFEVS 252 (366)
Q Consensus 195 ~----~pP~~~~~~GrvyR~d~----D~tH~~~FhQ---~egl~v~-----------~~i~~~~lk~~l~~~~~~~fg~~ 252 (366)
+ ..++++|-+|+||+.+. |.+...-+.| +-+++.+ +.++|-++||.++.++..+ |.+
T Consensus 76 N~~~~~~~~~lFEiG~vf~~~~~~~~~~~~~~~~~e~~~l~~~~~G~~~~~~w~~~~~~~df~~~Kgive~ll~~l-gi~ 154 (213)
T 3ica_A 76 NLRRKHLSLYLFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRV-GIE 154 (213)
T ss_dssp HHTTTCSEEEEEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHT-TCC
T ss_pred HHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCC
T ss_conf 6653466635897411661477765432101002035189999988865666565433005999999999999982-998
Q ss_pred CCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHH
Q ss_conf 662645423889852661036787505880422468834898457563888998569880003799631344699
Q gi|254780317|r 253 SLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRI 327 (366)
Q Consensus 253 ~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRl 327 (366)
......+++.-+|- |+--.++. . +.-+||-+|.+||++++..||+.++ ++|-+-+|-|
T Consensus 155 ~~~~~~~~~~~~~~-~~~~a~i~-----------~--~~~~iG~~G~l~p~i~~~~~i~~~v---~~~Ei~ld~L 212 (213)
T 3ica_A 155 TGAYTLKTADNDLY-ASAMEVKT-----------R--SGKLLGTFGTVSTELIKRFEIEQPV---YFAELLWDAL 212 (213)
T ss_dssp GGGEEEEECCCTTE-EEEEEEEE-----------T--TCCEEEEEEEECHHHHHHTTCCSCE---EEEEEEHHHH
T ss_pred CCCCCCCCCCCCCC-CCCEEEEE-----------E--CCCEEEEEEEECHHHHHHCCCCCCE---EEEEEEHHHH
T ss_conf 32130225564335-66236887-----------7--8959999999889999874979987---9999997993