HHsearch results for GI: 254780317 and protein with PDBid: 3l4g_A
>3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=100.00 E-value=0 Score=685.09 Aligned_cols=259 Identities=32% Similarity=0.566 Sum_probs=228.4
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEE-ECCCEEECHHHHHHHHCCCCCCCCCCCCCEE
Q ss_conf 766676543100000112321226742389999999999998739876-2372341588988861898877331633127
Q gi|254780317|r 89 LIFEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFAL-EEGSDIETDYYNFAALNFPDDHPARQMHDTF 167 (366)
Q Consensus 89 ~~~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v-~eGPEIEtd~~NFdaLNiP~~HPARdmqDTF 167 (366)
..|++.....+|+++| +++...|++||+++++++|++||.+|||++ .+||.|||+|||||+||+|+|||||++||||
T Consensus 200 g~wk~~~fk~yn~~~~--~~~~~~G~~HPl~~~~~~ir~if~~mGF~E~~~~~~Ves~fwNFDaLf~PqdHPaRd~~DTf 277 (508)
T 3l4g_A 200 GSWRDRPFKPYNFLAH--GVLPDSGHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTF 277 (508)
T ss_dssp STTTTSCCCCCCSSSC--CCCCCCCBCCHHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSC
T ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCEEEECCHHHHHHCCCCCCCCCCCCCEE
T ss_conf 6411276753420586--67788888587999999999999868988735898156201313533487458988736868
Q ss_pred EEECCCC----------------------------------CCCCCCCCCCCCHHHHHHHH-----CCCEEEEEECCCCC
Q ss_conf 7505666----------------------------------55632244676305555430-----36312254105764
Q gi|254780317|r 168 FVPGIAG----------------------------------GKHKLLRTHTSPVQIRVMES-----QDLPIKVIVPGKTY 208 (366)
Q Consensus 168 yl~~~~~----------------------------------~~~~lLRthTS~vQiR~m~~-----~~pP~~~~~~Grvy 208 (366)
|++.... +.+.+||||||++|+|+|.. ..+|+|++|+||||
T Consensus 278 Yl~~~~~~~~~~~d~~~~v~~~h~~g~~~~~g~~~~~~~~~~~~~vLRtHtt~~~~r~l~~~~~~~~~~p~k~f~i~rvf 357 (508)
T 3l4g_A 278 FLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVF 357 (508)
T ss_dssp BBSTTCBCSCCCHHHHHHHHHHHHTCBTTBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEE
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 85686433446289998877664127766545444434333223344578872109999988635898980452455523
Q ss_pred CCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECC
Q ss_conf 7454-421378100200578617866899988999999997088866264542388985266103678750588042246
Q gi|254780317|r 209 RRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDE 287 (366)
Q Consensus 209 R~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~ 287 (366)
|+|+ |+||+|+|||+||+++|+++|++||||+|+.|+++++. .++||||+||||||||+||+|+|..|
T Consensus 358 R~e~~D~tH~~~fhQ~eg~v~~~~~~~~~L~~~l~~~~~~lg~---~~vR~~paYfPfTePS~Ev~v~~~g~-------- 426 (508)
T 3l4g_A 358 RNETLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGI---TQLRFKPAYNPYTEPSMEVFSYHQGL-------- 426 (508)
T ss_dssp CCSCCCSSSCSEEEEEEEEEEEESCCHHHHHHHHHHHHHTTTC---CCCEEEECCCTTCSSEEEEEECCSTT--------
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCC---CEEEECCCCCCCCCCEEEEEEECCCC--------
T ss_conf 4677867657765303114622785699999999999997399---64870689899999808999983899--------
Q ss_pred CCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHCC--HHHHHHCC---CCCCC-CCCC
Q ss_conf 883489845756388899856988000379963134469979973897058766358--88887448---98446-8841
Q gi|254780317|r 288 GTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFGAD--VRWIEHYG---FSPLD-IPPL 361 (366)
Q Consensus 288 ~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~~d--~rfl~qf~---~~~~~-~~~~ 361 (366)
.+||||+||||+||+||+++|+ |+.|+|||||+|||||||++|||+|||+||++| ++||+.-. |.|++ .|+.
T Consensus 427 -~~WlEv~g~G~~rpevL~~~Gi-~~~~~~~AfGlGLERlAMl~~gI~DIR~l~~~~~~l~~~~~~~~~~~~~~~~~p~~ 504 (508)
T 3l4g_A 427 -KKWVEVGNSGVFRPEMLLPMGL-PENVSVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYDSPLCRLDAEPRPPPT 504 (508)
T ss_dssp -SSCEEEEEEECCCHHHHGGGTC-CTTEEEEEEEEESHHHHTTTTTCSCGGGTSSTTCCHHHHHHCCCTTSSTTTCC---
T ss_pred -CCEEEEECCCCCCHHHHHHCCC-CCCCEEEEEEECHHHHHHHHCCCCHHHHHHCCCCCHHHHHCCCCEECCCCCCCCCC
T ss_conf -9748982572577999986698-98964999864398999998099767786257888888734874111567789871
Q ss_pred C
Q ss_conf 4
Q gi|254780317|r 362 F 362 (366)
Q Consensus 362 ~ 362 (366)
+
T Consensus 505 ~ 505 (508)
T 3l4g_A 505 Q 505 (508)
T ss_dssp -
T ss_pred C
T ss_conf 0