HHsearch results for GI: 254780317 and protein with PDBid: 3net_A
>3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP}
Probab=97.65 E-value=0.0006 Score=48.27 Aligned_cols=134 Identities=13% Similarity=0.130 Sum_probs=84.9
Q ss_pred HHHHCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHC-CC--------CCCCCCCCC
Q ss_conf 543100000112321-22674238999999999999873987623723415889888618-98--------877331633
Q gi|254780317|r 95 SSQSVDVSLPVFSSP-CHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALN-FP--------DDHPARQMH 164 (366)
Q Consensus 95 ~~E~iDVTLP~~~~~-~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLN-iP--------~~HPARdmq 164 (366)
..++++...|. |-+ ..+-...-...+.+.++++|.+-||+.++-|-+|..- .|.+-. .- ..++...-.
T Consensus 6 ~~~~~~~~~p~-G~~d~lP~~~~~~~~i~~~~r~~~~~~Gy~eI~tP~le~~d-l~~~sg~~~~~~~~~~~~~~~~~~~~ 83 (465)
T 3net_A 6 KNDKINFSTPS-GFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLE-VLQAKGNQGDNIIYGLEPILPPNRQA 83 (465)
T ss_dssp ---CCCCSCCT-TCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHH-HHHGGGCC--CBEEEEEEEC------
T ss_pred CCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHH-HHCCCCCCCCEEEEEECCCCCCHHHH
T ss_conf 55578878999-86203986999999999999999998799799965117388-87065776662433220245501244
Q ss_pred CEEEEECCCCCCCCCCCCCCCCHHHHHHHH----CCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCC
Q ss_conf 127750566655632244676305555430----363122541057647454-4213781002005786178
Q gi|254780317|r 165 DTFFVPGIAGGKHKLLRTHTSPVQIRVMES----QDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDS 231 (366)
Q Consensus 165 DTFyl~~~~~~~~~lLRthTS~vQiR~m~~----~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~ 231 (366)
.++... ...+....||.-.|+--+|...+ ...|+|+...|+|||++. -+.+.-+|+|.++=+++.+
T Consensus 84 ~~~~~~-d~~g~~l~Lrpd~t~~~~r~~~~~~~~~~~p~r~~~~g~~~R~e~~~~gr~Ref~Q~~~ei~g~~ 154 (465)
T 3net_A 84 EKDKSG-DTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGRE 154 (465)
T ss_dssp -----------CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSS
T ss_pred HCCCCC-CCCCCEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCHHHCCCEEEEECC
T ss_conf 416656-77886799537887899999985110147987999960188823788785023220675477157