RPSBLAST alignment of GI: 254780317 and protein with PDBid: 2du3
>2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* Length = 534
Score = 283 bits (725), Expect = 5e-77
Identities = 55/346 (15%), Positives = 105/346 (30%), Gaps = 87/346 (25%)
Query: 92 EQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDY----- 146
E ++ +S + P G+ HP+ I + ++ +GF+ I D
Sbjct: 25 EILAERSPNELYPRVGFS--FGKEHPLFATIQRLREAYLSIGFSEVVNPLIVEDVHVKKQ 82
Query: 147 ------YNFAALNFPDDHP-----------------------ARQMHDTFFV--PGIAGG 175
+ P ++ + + F G G
Sbjct: 83 FGREALAVLDRCFYLATLPKPNVGISAEKIRQIEAITKREVDSKPLQEIFHRYKKGEIDG 142
Query: 176 ------------------------------------KHKLLRTHTSPVQIRVM----ESQ 195
LR+H + + +
Sbjct: 143 DDLSYLIAEVLDVDDITAVKILDEVFPEFKELKPISSTLTLRSHMTTGWFITLSHIADKL 202
Query: 196 DLPIKVIVPGKTYRRDS--DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSS 253
LPIK+ + +RR+ D+T + ++V + ++ + + V E+ + F +
Sbjct: 203 PLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSVDDGKAVAEALLRQFGF-EN 261
Query: 254 LQMRFRPSFFPFTEPSFEVDVRCSFSDGI-IKFDEGTEWMEILGCGMVDPRVLRGVGIDP 312
+ R + P + +V + W+EI G+ P L I
Sbjct: 262 FRFRKDEKRSKYYIPDTQTEVFAFHPKLVGSSTKYSDGWIEIATFGIYSPTALAEYDIP- 320
Query: 313 DIYQGFAWGMGLDRIAMLKYGMPDVREFFGADVRWIEHYGFSPLDI 358
Y G+G++R+AM+ YG DVR+ + S LDI
Sbjct: 321 --YPVMNLGLGVERLAMILYGYDDVRKMVYPQIHGEIK--LSDLDI 362