RPSBLAST alignment of GI: 254780317 and protein with PDBid: 2odr
>2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 665
Score = 256 bits (654), Expect = 7e-69
Identities = 49/277 (17%), Positives = 92/277 (33%), Gaps = 29/277 (10%)
Query: 108 SPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYN--FAALNFPDDHPARQMHD 165
S +I + + E + ++G+ D AL + + + D
Sbjct: 126 SDEKISQIEKLGIKVSEHKESLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILED 185
Query: 166 TF--FVPGIAGGKHKLLRTHTSPVQIRVM----ESQDLPIKVIVPGKTYRRD--SDSTHS 217
F F A LR+H + + + LP K+ + +RR+ D +H
Sbjct: 186 VFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHL 245
Query: 218 PMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCS 277
+H + + I + + + E F ++ + + P + +V
Sbjct: 246 MTYHSASCAIAGEGVDINDGKAIAEGLLSQFGF-TNFKFIPDEKKSKYYTPETQTEVYA- 303
Query: 278 FSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDV 337
+ EW+E+ G+ P L GID G+G++R+AM+ DV
Sbjct: 304 ------YHPKLKEWLEVATFGVYSPVALSKYGID---VPVMNLGLGVERLAMISGNFADV 354
Query: 338 RE-----FFGADVRWIEHYGFSPLD---IPPLFSRLA 366
RE F+ + LD + L
Sbjct: 355 REMVYPQFYEHKLNDRNVASMVKLDKVPVMDEIYDLT 391