RPSBLAST alignment of GI: 254780317 and protein with PDBid: 2odr
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 648
Score = 251 bits (643), Expect = 2e-67
Identities = 50/268 (18%), Positives = 91/268 (33%), Gaps = 26/268 (9%)
Query: 108 SPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYN--FAALNFPDDHPARQMHD 165
S +I + + E + ++G+ D AL + + + D
Sbjct: 126 SDEKISQIEKLGIKVSEHKESLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILED 185
Query: 166 TF--FVPGIAGGKHKLLRTHTSPVQIRV----MESQDLPIKVIVPGKTYRRDS--DSTHS 217
F F A LR+H + M + LP K+ + +RR+ D +H
Sbjct: 186 VFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHL 245
Query: 218 PMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCS 277
+H + + I + + + E F ++ + + P + +V
Sbjct: 246 MTYHSASCAIAGEGVDINDGKAIAEGLLSQFGF-TNFKFIPDEKKSKYYTPETQTEVYA- 303
Query: 278 FSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDV 337
+ EW+E+ G+ P L GID G+G++R+AM+ DV
Sbjct: 304 ------YHPKLKEWLEVATFGVYSPVALSKYGID---VPVMNLGLGVERLAMISGNFADV 354
Query: 338 RE-----FFGADVRWIEHYGFSPLDIPP 360
RE F+ + LD P
Sbjct: 355 REMVYPQFYEHKLNDRNVASMVKLDKVP 382