RPSBLAST alignment of GI: 254780317 and protein with PDBid: 3dsq

>3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A Length = 288

 Score =  112 bits (282), Expect = 1e-25
 Identities = 45/295 (15%), Positives = 80/295 (27%), Gaps = 36/295 (12%)

Query: 54  NLDSQQVSARGAILNQLKVDISGKISARKDFIRNQLIFEQISSQSVDVSLPVFSSPCHRG 113
            L S     +   L +L            D +     F+ I  Q +              
Sbjct: 9   PLSSFWTKVQYQRLKELNASGEQLEMGFSDALSRDRAFQGIEHQLMSQGKRHLEQLRTVK 68

Query: 114 RIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIA 173
               + ++ +++       GF ++  +         A +   +DHP              
Sbjct: 69  HRPALLELEEKLAKALHQQGF-VQVVTPTIITKSALAKMTIGEDHPLFSQVFWLD----- 122

Query: 174 GGKHKLLRTHTSPVQIRVME----SQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVV 228
               K LR   +P    +        D PI++   G  YR++S  + H   F  +    +
Sbjct: 123 --GKKCLRPMLAPNLYTLWRELERLWDKPIRIFEIGTCYRKESQGAQHLNEFTMLNLTEL 180

Query: 229 --SDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFD 286
                     L  +     ++          F             VDV            
Sbjct: 181 GTPLEERHQRLEDMARWVLEAAGIR-----EFELVTESSVVYGDTVDV------------ 223

Query: 287 EGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFF 341
                +E L  G + P  L       D       G GL+R+ M++ G   V+   
Sbjct: 224 -MKGDLE-LASGAMGPHFLDEKWEIFD--PWVGLGFGLERLLMIREGTQHVQSMA 274