HHsearch alignment for GI: 254780318 and conserved domain: COG0292
>COG0292 RplT Ribosomal protein L20 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=340.01 Aligned_cols=118 Identities=59% Similarity=0.898 Sum_probs=116.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 98775665556899899997413156452369999999999999987469988999999999867799997189999999
Q gi|254780318|r 1 MTRVKRGVVSSAKHKKVLKSAKGFYGRRKNTIRAAKAAVDRSQQYAYRDRRVKKRDFRSLWIQRINAAVRVYDLNYSQFI 80 (123)
Q Consensus 1 M~Rvk~g~~~~~rrkkilk~akGfrG~r~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~r~~g~sYS~fi 80 (123)
T Consensus 1 M~RvK~gv~~r~RrKkiLK~AKG~~G~r~~~~r~Akq~v~ka~~yaYrdRr~rKRdFR~LWI~RINAA~R~~GlsYS~fi 80 (118)
T COG0292 1 MARVKRGVVARARRKKILKLAKGYRGARSRLYRVAKQAVMKALQYAYRDRRQRKRDFRKLWIARINAAARENGLSYSRFI 80 (118)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 97420117889999999999520353421499999999999999999878988627999999999999998289599999
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99996298646899999974198999999999999855
Q gi|254780318|r 81 NGLHKAGIVLDRKVLSDLAITQLDSFKKIVELSRSRLL 118 (123)
Q Consensus 81 ~~L~~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~l~ 118 (123)
T Consensus 81 ~gLkkA~I~inRKvLadlAi~dp~aF~~lv~~aK~al~ 118 (118)
T COG0292 81 NGLKKAGIEIDRKVLADLAINDPAAFAALVEKAKAALA 118 (118)
T ss_pred HHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 89998165100999999980289999999999987539