HHsearch results for GI: 254780318 and protein with PDBid: 2zjr_N
>2zjr_N 50S ribosomal protein L20; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: a.144.2.1 PDB: 1nwx_O* 1nwy_O* 1sm1_O* 1xbp_O* 1yl3_1 2b66_U 2b9n_U 2b9p_U 2zjp_N* 2zjq_N 1nkw_O 3cf5_N* 3dll_N* 1pnu_O 1pny_O 1vor_R 1vou_R 1vow_R 1voy_R 1vp0_R
Probab=100.00 E-value=0 Score=336.74 Aligned_cols=118 Identities=53% Similarity=0.837 Sum_probs=116.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 98775665556899899997413156452369999999999999987469988999999999867799997189999999
Q gi|254780318|r 1 MTRVKRGVVSSAKHKKVLKSAKGFYGRRKNTIRAAKAAVDRSQQYAYRDRRVKKRDFRSLWIQRINAAVRVYDLNYSQFI 80 (123)
Q Consensus 1 M~Rvk~g~~~~~rrkkilk~akGfrG~r~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~r~~g~sYS~fi 80 (123)
|||||+|+++++|||+||++|+||+|++++||++|+|+|+|||+|||+||+.+||+||+|||+|||||+|++|++||+||
T Consensus 1 M~Rvkrg~~~~~rrkkilk~akGf~G~~~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~R~~g~~YS~fi 80 (118)
T 2zjr_N 1 MPRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFI 80 (118)
T ss_dssp -CCCCCTTHHHHHHHHHHTTCSSCCGGGGTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99877728989999999998063677765517999999999999999459999999999999999999999499899999
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99996298646899999974198999999999999855
Q gi|254780318|r 81 NGLHKAGIVLDRKVLSDLAITQLDSFKKIVELSRSRLL 118 (123)
Q Consensus 81 ~~L~~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~l~ 118 (123)
+||+++||.|||||||||||+||++|++||+++|++|+
T Consensus 81 ~~L~k~~i~LnRKiLs~LAi~dp~~F~~lv~~~k~a~~ 118 (118)
T 2zjr_N 81 NGLKRANIDLNRKVLADIAAREPEAFKALVDASRNARQ 118 (118)
T ss_dssp HHHHHCTTCCCCSSHHHHHHHCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 99999388533999999996089999999999998629