HHsearch results for GI: 254780318 and protein with PDBid: 3ofq_Q
>3ofq_Q 50S ribosomal protein L20; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_O 1p86_O 2awb_Q 2aw4_Q 2i2v_Q 2j28_Q 2i2t_Q* 2qao_Q* 2qba_Q* 2qbc_Q* 2qbe_Q 2qbg_Q 2qbi_Q* 2qbk_Q* 2qov_Q 2qox_Q 2qoz_Q* 2qp1_Q* 2rdo_Q 2vhm_Q ...
Probab=100.00 E-value=0 Score=323.96 Aligned_cols=117 Identities=53% Similarity=0.873 Sum_probs=115.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 87756655568998999974131564523699999999999999874699889999999998677999971899999999
Q gi|254780318|r 2 TRVKRGVVSSAKHKKVLKSAKGFYGRRKNTIRAAKAAVDRSQQYAYRDRRVKKRDFRSLWIQRINAAVRVYDLNYSQFIN 81 (123)
Q Consensus 2 ~Rvk~g~~~~~rrkkilk~akGfrG~r~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~r~~g~sYS~fi~ 81 (123)
.|||+|+++++||++||++|+||+|++++||++|+|+|+|||+|||+||+.+||+||+|||+|||||+|++|++||+||+
T Consensus 1 aRvkrg~~~~~rrkkilk~akGf~G~r~~~~r~A~~~v~kAl~yayr~Rk~kKr~fR~LWI~RINAa~r~~g~sYs~fi~ 80 (117)
T 3ofq_Q 1 ARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFIN 80 (117)
T ss_dssp CCCCCSTTTHHHHHHHHHHHTTSCGGGGTCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTSCSHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 97766368899999999982523667665069999999999999997599999999999999999999837998999999
Q ss_pred HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 9996298646899999974198999999999999855
Q gi|254780318|r 82 GLHKAGIVLDRKVLSDLAITQLDSFKKIVELSRSRLL 118 (123)
Q Consensus 82 ~L~~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~l~ 118 (123)
||+++||.|||||||||||+||.+|++||+++|++|+
T Consensus 81 ~L~~~~I~LnRKvLs~lAi~dp~~F~~lv~~ak~~la 117 (117)
T 3ofq_Q 81 GLKKASVEIDRKILADIAVFDKVAFTALVEKAKAALA 117 (117)
T ss_dssp HHHTTSSCCCTTTGGGGGTSCHHHHHHHHHHHHHHHC
T ss_pred HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
T ss_conf 9999089522999999996088999999999998639