HHSEARCH alignment of GI: 254780318 and SCOP domain: d1gyza_

Alignment

Probab=99.90  E-value=1.2e-25  Score=168.11  Aligned_cols=60  Identities=57%  Similarity=0.948  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf             998677999971899999999999629864689999997419899999999999985565
Q gi|254780318|r   61 WIQRINAAVRVYDLNYSQFINGLHKAGIVLDRKVLSDLAITQLDSFKKIVELSRSRLLVD  120 (123)
Q Consensus        61 WI~RINAa~r~~g~sYS~fi~~L~~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~l~~~  120 (123)
                      ||+|||||+|++|++||+||++|++++|.||||||||||++||++|++||+.+|++|+++
T Consensus         1 WI~RINAa~r~~g~~YS~fi~~L~k~~I~LnRK~La~LAi~dp~~F~~lv~~~k~~l~~~   60 (60)
T d1gyza_           1 WIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEALQVQ   60 (60)
T ss_dssp             CCHHHHHHHTTTTCCSHHHHHHHHHHTCCCCSSSSHHHHHHCHHHHHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf             969999999995998999999999948977399999999608999999999999975579

SCOP domain information

class: All alpha proteins
fold: PABP domain-like
superfamily: Ribosomal protein L20
family: Ribosomal protein L20
domain: Ribosomal protein L20
species: Aquifex aeolicus [TaxId: 63363]