HHSEARCH alignment of GI: 254780319 and SCOP domain: d2j0181

Alignment

Probab=99.93  E-value=2.9e-27  Score=151.21  Aligned_cols=64  Identities=45%  Similarity=0.582  Sum_probs=61.9

Q ss_pred             CCCCCCCHHHEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHHCCCC
Q ss_conf             87323301212257759980970324885254158804654146986837778999999858688
Q gi|254780319|r    2 PKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPNG   66 (67)
Q Consensus         2 PKmKT~k~akKRFk~T~sGKvkr~~agk~H~l~~Ks~krkR~lr~~~~v~~~~~~~i~r~llPYg   66 (67)
                      ||||||+||+|||++||||||++++||++|+|+++|++++|+|+++.+|+++|.+.|. .||||-
T Consensus         1 PKmKT~k~a~KRFk~T~sGKikr~~ag~~H~l~~Ks~k~kR~lr~~~~v~~~~~k~ik-~lLPY~   64 (64)
T d2j0181           1 PKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIK-LLLPYE   64 (64)
T ss_dssp             CCCCCCHHHHHHCEECSSSCEEECCTTTTTCSSCSCCSTTTSCSCEECCSSHHHHHHT-TTTTC-
T ss_pred             CCCCCCHHHHHHEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHH-HHCCCC
T ss_conf             9876511235314676898787330677655434898899865798337799999999-848999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: L35p-like
superfamily: L35p-like
family: Ribosomal protein L35p
domain: Ribosomal protein L35p
species: Thermus thermophilus [TaxId: 274]