HHsearch alignment for GI: 254780320 and conserved domain: PRK00028
>PRK00028 infC translation initiation factor IF-3; Reviewed.
Probab=100.00 E-value=0 Score=337.10 Aligned_cols=135 Identities=53% Similarity=0.866 Sum_probs=133.3
Q ss_pred CHHHHHCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 93378579949999887558779998457888888765432110022222002689740086799999999999960379
Q gi|254780320|r 1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGC 80 (136)
Q Consensus 1 l~~A~~~~lDLV~vs~~~~PPVcKi~dygK~~ye~~Kk~k~~Kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~ 80 (136)
T Consensus 39 l~~A~~~~LDLV~vs~~~~PPVcKi~dygK~~ye~~kk~k~~kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~ 118 (175)
T PRK00028 39 LRLAEEAGLDLVEISPNAKPPVCKIMDYGKFKYEQQKKAKEAKKKQKVIEVKEIKLRPKIDEHDYQVKLKNARRFLEKGD 118 (175)
T ss_pred HHHHHHCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99999819948998789999868985077899999988877652146532003578657560299999999999997799
Q ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
Q ss_conf 1999999709743573568999999999842243203677324876999992046
Q gi|254780320|r 81 KVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDCEPKFEGRQMIMILSSKC 135 (136)
Q Consensus 81 kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~~pk~~Gr~~~~~l~Pkk 135 (136)
T Consensus 119 kVki~v~~rGRe~~~~e~g~~ll~~~~~~l~~i~~~e~~pk~~Gr~~~~~l~P~k 173 (175)
T PRK00028 119 KVKVTIRFRGREIAHKELGMELLERFAEDLEDIAKVEQEPKMEGRQMIMVLAPKK 173 (175)
T ss_pred EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEECCC
T ss_conf 7999999877556588999999999999722245851477544875999991179