HHsearch alignment of GI: 254780320 and MMDB domain: 1tif_A_

>1tif_A (A:) IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus}
Probab=99.69  E-value=1.8e-17  Score=124.84  Aligned_cols=44  Identities=43%  Similarity=0.745  Sum_probs=41.9

Q ss_pred             CHHHHHCCCCEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHH
Q ss_conf             93378579949999887558779998457888888765432110
Q gi|254780320|r    1 MQMAQEANLDLVEIDSSVTPSVCKILDLRKLRYTIQKNAVEARK   44 (136)
Q Consensus         1 l~~A~~~~lDLV~vs~~~~PPVcKi~dygK~~ye~~Kk~k~~Kk   44 (136)
                      |++|++.|||||+|||+++||||||||||||+||++++.++++|
T Consensus        35 l~~A~~~~lDLV~v~~~~~PPVckimdygK~~ye~~kk~ke~kK   78 (78)
T 1tif_A           35 LEIAARRNLDLVLVAPNAKPPVCRIMDYGKFRFEQQKKEKEARK   78 (78)
T ss_dssp             HHHHHHTTCEEEEEETTSSSCEEEEECHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHHCC
T ss_conf             99999816787984477899889997523489999988987259