HHsearch alignment of GI: 254780320 and MMDB domain: 2ife_A_

>2ife_A (A:) Protein (translation initiation factor IF3); gene regulation; NMR {Escherichia coli}
Probab=99.97  E-value=4e-31  Score=206.19  Aligned_cols=97  Identities=45%  Similarity=0.724  Sum_probs=93.8

Q ss_pred             HHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             43211002222200268974008679999999999996037919999997097435735689999999998422432036
Q gi|254780320|r   39 AVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC  118 (136)
Q Consensus        39 ~k~~Kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~  118 (136)
                      .++++++|+.+++|||+|+|+||+|||++|++++++||++||+|+|+|+|||||++|+|.|.++|++|+++|+++|++|+
T Consensus         1 lke~kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVkv~i~~rGRe~~~~e~g~~ll~~i~~~l~~~~~~e~   80 (100)
T 2ife_A            1 MEFQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES   80 (100)
T ss_dssp             ---------CCEEEEEEECTTCCHHHHTHHHHHHHHHHHTTEEEEEEECCSSCTTCCSSHHHHHHHHHHHHHTTTEEESC
T ss_pred             CCHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf             92132057750478899735857537999999999999779969999998153002888999999999998531307824


Q ss_pred             CC-CCCCCEEEEEEEECC
Q ss_conf             77-324876999992046
Q gi|254780320|r  119 EP-KFEGRQMIMILSSKC  135 (136)
Q Consensus       119 ~p-k~~Gr~~~~~l~Pkk  135 (136)
                      .| +++|++|+|+|+|++
T Consensus        81 ~p~~~~G~~~~~~l~P~k   98 (100)
T 2ife_A           81 FPTKIEGRQMIMVLAPKK   98 (100)
T ss_dssp             CCCCCCSSCCEEEEEECC
T ss_pred             CCCCCCCCEEEEEEECCC
T ss_conf             676556873999993179