HHsearch alignment of GI: 254780320 and MMDB domain: 2ife_A_
>2ife_A (A:) Protein (translation initiation factor IF3); gene regulation; NMR {Escherichia coli}
Probab=99.97 E-value=4e-31 Score=206.19 Aligned_cols=97 Identities=45% Similarity=0.724 Sum_probs=93.8
Q ss_pred HHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 43211002222200268974008679999999999996037919999997097435735689999999998422432036
Q gi|254780320|r 39 AVEARKKQKSTGIKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERFGEISRIDC 118 (136)
Q Consensus 39 ~k~~Kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVki~i~frGRe~~~~e~g~~~l~~i~~~l~~~~~~e~ 118 (136)
.++++++|+.+++|||+|+|+||+|||++|++++++||++||+|+|+|+|||||++|+|.|.++|++|+++|+++|++|+
T Consensus 1 lke~kkkq~~~~~KEir~~~~I~~hDl~~K~k~~~~FL~~G~kVkv~i~~rGRe~~~~e~g~~ll~~i~~~l~~~~~~e~ 80 (100)
T 2ife_A 1 MEFQKKKQKVIQVKEIKFRPGTDEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES 80 (100)
T ss_dssp ---------CCEEEEEEECTTCCHHHHTHHHHHHHHHHHTTEEEEEEECCSSCTTCCSSHHHHHHHHHHHHHTTTEEESC
T ss_pred CCHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEEEC
T ss_conf 92132057750478899735857537999999999999779969999998153002888999999999998531307824
Q ss_pred CC-CCCCCEEEEEEEECC
Q ss_conf 77-324876999992046
Q gi|254780320|r 119 EP-KFEGRQMIMILSSKC 135 (136)
Q Consensus 119 ~p-k~~Gr~~~~~l~Pkk 135 (136)
.| +++|++|+|+|+|++
T Consensus 81 ~p~~~~G~~~~~~l~P~k 98 (100)
T 2ife_A 81 FPTKIEGRQMIMVLAPKK 98 (100)
T ss_dssp CCCCCCSSCCEEEEEECC
T ss_pred CCCCCCCCEEEEEEECCC
T ss_conf 676556873999993179