RPSBLAST alignment of GI: 254780320 and protein with PDBid: 1i96
>1i96_V Translation initiation factor IF3; 30S ribosome; HET: WO2; 4.20A {Thermus thermophilus} SCOP: d.68.1.1 Length = 89
Score = 99.8 bits (249), Expect = 2e-22
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 51 IKEVKMRPVIDLHDLQVKLKAIDGFLRDGCKVKISVKFRGREIMHQDLGRELLSNIKERF 110
+K +K R ID HD Q KL I FL++G KVK+++ FRGRE+ H +LG +L+ + E
Sbjct: 2 VKSIKFRVKIDEHDYQTKLGHIKRFLQEGHKVKVTIMFRGREVAHPELGERILNRVTEDL 61
Query: 111 GEISRIDCEPKFEGRQMIMILSSK 134
+++ ++ +P+ GR M M+L+
Sbjct: 62 KDLAVVEMKPEMLGRDMNMLLAPV 85