HHsearch alignment for GI: 254780321 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=97.81 E-value=3e-05 Score=54.70 Aligned_cols=161 Identities=19% Similarity=0.252 Sum_probs=85.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCC-CCCCC-CCCEEECCCHHHHH--HCCEEEE---E-EE----EEEEEC----CC
Q ss_conf 317999801389877889999998298-05444-43113058677987--1950523---2-79----999743----78
Q gi|254780321|r 11 IRNFSIVAHIDHGKSTLADRFIQHCRG-LTERE-MSSQVLDNMDIERE--RGITIKA---Q-TV----RLNYTS----TD 74 (606)
Q Consensus 11 IRN~~IiaHvDhGKTTL~d~lL~~tg~-i~~~~-~~~~vlD~~~~Ere--RGITIka---~-~~----~~~~~~----~~ 74 (606)
T Consensus 13 ~~~i~v~Gp~GSGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~~ 92 (202)
T COG0378 13 MLRIGVGGPPGSGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELVL 92 (202)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 48999617998678999999999997527768996404006559999737798068740387658867889999999863
Q ss_pred C-CEEEEEEEECCCC--CHHHHHHHHHHHHCC-EEEEEEECCCCCCHHHHHHHHHHHHCCC--CEEEEECCCCCC---CC
Q ss_conf 8-4389999617873--002799999997302-6899998687886558999999997099--679983267887---53
Q gi|254780321|r 75 A-KDYQLNLIDTPGH--VDFTYEVSRSLSACE-GSLLVVDATQGVEAQTLANVYQAIDNNH--EIITVLNKADLP---SA 145 (606)
Q Consensus 75 ~-~~y~iNlIDTPGH--~DF~~EV~r~l~a~d-gaiLvVdA~~Gvq~QT~~~~~~A~~~~l--~~I~viNKiD~~---~A 145 (606)
T Consensus 93 ~~~~~Dll~iEs~GNL~~~~sp~L------~d~~~v~VidvteGe~~P~K~g------P~i~~aDllVInK~DLa~~v~~ 160 (202)
T COG0378 93 DFPDLDLLFIESVGNLVCPFSPDL------GDHLRVVVIDVTEGEDIPRKGG------PGIFKADLLVINKTDLAPYVGA 160 (202)
T ss_pred CCCCCCEEEEECCCCEECCCCCCH------HHCEEEEEEECCCCCCCCCCCC------CCEEEEEEEEEEHHHHHHHHCC
T ss_conf 177677899923764324468041------3046999998788888765579------9646741899856773877286
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 2113388877555322321000111002232006787763
Q gi|254780321|r 146 DPDRVKKQIEETIGISTEDALLVSAKTGEGIPLLLERIVQ 185 (606)
Q Consensus 146 ~~e~v~~ei~~~~g~~~~~ii~vSAktG~GV~~LLd~Iv~ 185 (606)
T Consensus 161 dlevm~~da~~~n--p~~~ii~~n~ktg~G~~~~~~~i~~ 198 (202)
T COG0378 161 DLEVMARDAKEVN--PEAPIIFTNLKTGEGLDEWLRFIEP 198 (202)
T ss_pred CHHHHHHHHHHHC--CCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 6999999999849--9998899847878689999999876