HHsearch alignment for GI: 254780321 and conserved domain: COG0480

>COG0480 FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=838.56  Aligned_cols=467  Identities=34%  Similarity=0.527  Sum_probs=415.2

Q ss_pred             CCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCC---CCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEE
Q ss_conf             9852531799980138987788999999829805444---4311305867798719505232799997437884389999
Q gi|254780321|r    6 TPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTERE---MSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNL   82 (606)
Q Consensus         6 ~p~~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~---~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNl   82 (606)
T Consensus         5 ~~~~~~RNigI~aHidaGKTTltE~lL~~tG~i~k~G~v~~g~~~~D~~e~EqeRGITI~saa~s~~~~~----~~~iNl   80 (697)
T COG0480           5 MPLERIRNIGIVAHIDAGKTTLTERILFYTGIISKIGEVHDGAATMDWMEQEQERGITITSAATTLFWKG----DYRINL   80 (697)
T ss_pred             CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECC----CEEEEE
T ss_conf             5544540799996047880778899998759757785566786547887889866977864056899708----658999


Q ss_pred             EECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH--
Q ss_conf             617873002799999997302689999868788655899999999709967998326788753211338887755532--
Q gi|254780321|r   83 IDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGI--  160 (606)
Q Consensus        83 IDTPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~--  160 (606)
T Consensus        81 IDTPGHVDFt~EV~rslrvlDgavvVvdaveGV~~QTEtv~rqa~~~~vp~i~fiNKmDR~~a~~~~~~~~l~~~l~~~~  160 (697)
T COG0480          81 IDTPGHVDFTIEVERSLRVLDGAVVVVDAVEGVEPQTETVWRQADKYGVPRILFVNKMDRLGADFYLVVEQLKERLGANP  160 (697)
T ss_pred             ECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             57997353477879988861650999988788300379999998655997599997843355673350999999867983


Q ss_pred             ---------------------------H-----------H--------------------H-------------------
Q ss_conf             ---------------------------2-----------3--------------------2-------------------
Q gi|254780321|r  161 ---------------------------S-----------T--------------------E-------------------  163 (606)
Q Consensus       161 ---------------------------~-----------~--------------------~-------------------  163 (606)
T Consensus       161 ~~v~~pIg~~~~f~g~idl~~~~~~~~~~~~~~~~~~ip~~~~~~~~e~r~~~~e~i~e~de~l~e~yl~g~e~~~~~i~  240 (697)
T COG0480         161 VPVQLPIGAEEEFEGVIDLVEMKAVAFGDGAKYEWIEIPADLKEIAEEAREKLLEALAEFDEELMEKYLEGEEPTEEEIK  240 (697)
T ss_pred             EEEECCCCCCCCCCCEEEHHHCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
T ss_conf             22321115730047636711067179757752431558778876789999999998861579999998668876479999


Q ss_pred             -------------HHHHHHHHCCCCCCHHHHHHHHHHHCCCCH------------------HHHHCCCCCCCCCEEECCC
Q ss_conf             -------------100011100223200678776321000111------------------1220123310121011475
Q gi|254780321|r  164 -------------DALLVSAKTGEGIPLLLERIVQQLPSPTSP------------------EGANAPLKALLIDSWYNSY  212 (606)
Q Consensus       164 -------------~ii~vSAktG~GV~~LLd~Iv~~iP~P~~~------------------~~~~~Pl~alVfds~~D~~  212 (606)
T Consensus       241 ~~i~~~~~~~~~~pvl~gsa~kn~gv~~lLdav~~~lPsP~e~~~~~g~~~~~~~~~~~~~~~~e~p~~a~vfKi~~d~~  320 (697)
T COG0480         241 KALRKGTIAGKIVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPIKGDLDDEIEKAVLRKASDEGPLSALVFKIMTDPF  320 (697)
T ss_pred             HHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCC
T ss_conf             99987653266256775010257757999999998789956645444767753230000468888865999999686487


Q ss_pred             CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CEEEEHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCC
Q ss_conf             725999981698735584588733556421012223355-4124010124712332201100244445420004667853
Q gi|254780321|r  213 LGVMVLVRIINGQLTKGQSIRLMGTNAKYQVERIGILTP-KMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTT  291 (606)
Q Consensus       213 ~G~I~~~RV~sG~lk~Gd~I~~~~~g~~~~v~~ig~~~~-~~~~v~~l~aGdVG~ii~gik~l~~~~vGDTl~~~~~p~~  291 (606)
T Consensus       321 ~g~l~~~RvysGtl~~G~~v~n~~~~~~erv~~l~~~~~~~~~~v~~~~AG~I~a----~~Gl~~~~tGdTl~~~~~~--  394 (697)
T COG0480         321 VGKLTFVRVYSGTLKSGSEVLNSTKGKKERVGRLLLMHGNEREEVDEVPAGDIVA----LVGLKDATTGDTLCDENKP--  394 (697)
T ss_pred             CCEEEEEEEECCEECCCCEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCEEE----EECCCCCCCCCEEECCCCC--
T ss_conf             8759999986437737988995799853787789871689502605405764899----9752355407856537876--


Q ss_pred             CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf             236455222212664212677024578899998886411221112--567600042028996376789888988866449
Q gi|254780321|r  292 SALPGFKPIQPVVFCGLFPVDATQFENLRTAINKLRLNDASFSFE--LENSTALGFGFRCGFLGLLHLEIIQERLEREFS  369 (606)
Q Consensus       292 ~~Lp~~~~~~P~v~~~i~p~~~~d~~~L~~aL~kL~~~D~sl~~e--~Ets~aLg~Gfr~gglG~LHLeVi~eRL~rEfg  369 (606)
T Consensus       395 v~~~~~~~pePVi~vavepk~~~d~~Kl~~aL~~l~~eDPt~~v~~d~Etge~i-----IsGmGELHLei~~drl~~~~~  469 (697)
T COG0480         395 VILESMEFPEPVISVAVEPKTKADQEKLSEALNKLAEEDPTFRVETDEETGETI-----ISGMGELHLEIIVDRLKREFG  469 (697)
T ss_pred             CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE-----EEECCHHHHHHHHHHHHHHCC
T ss_conf             465665479964899976788435899999999877538845899817766189-----982655549999998776419


Q ss_pred             CEEEEECCCCCEE-------------------------------------------------------------------
Q ss_conf             5069737823303-------------------------------------------------------------------
Q gi|254780321|r  370 LNLIGTSPSVVYE-------------------------------------------------------------------  382 (606)
Q Consensus       370 ~ev~~t~P~V~Yk-------------------------------------------------------------------  382 (606)
T Consensus       470 vev~~~~PqV~YrETi~~~~~~~~~~~kqsgg~~q~~~v~i~~EP~~~~~~~~f~~~i~~g~~P~~yi~~ve~G~~~a~~  549 (697)
T COG0480         470 VEVEVGKPQVAYRETIRKKSEVEGKHKKQSGGPGQYGHVYIEIEPLEDGSGFEFVDKIVGGVVPKEYIPAVEKGFREALK  549 (697)
T ss_pred             CEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             25893498168886614665430345303688985537999997589876417750005576726654778999999985


Q ss_pred             -------------EEEECCCEEECCC-HHHCCCHHHHH----------HHHCCEEEEEEEECCCCCHHHHHHHHHHHHEE
Q ss_conf             -------------3531564541269-66625867788----------86232699999808310003899988630014
Q gi|254780321|r  383 -------------LYMHDGSMQKLSN-PIDMPEVTKIA----------ELREPWIQVTIITPNEYLGSILKLCQERRGIQ  438 (606)
Q Consensus       383 -------------v~~~dG~~~~Vd~-p~~~p~~~~i~----------~i~EPi~~~~I~~P~ey~G~Vm~~l~~RRG~~  438 (606)
T Consensus       550 ~GpLag~pv~dvkv~L~dgs~h~vdss~~af~~a~~~a~~~a~~~a~P~lLEPi~~veI~~P~d~~G~V~~~l~~rRG~I  629 (697)
T COG0480         550 SGPLAGYPVVDVKVTLLDGSYHEVDSSEMAFKIAASLAFKEAMLKAKPVLLEPIMKVEITTPEEYMGDVIGDLNSRRGQI  629 (697)
T ss_pred             CCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHCHHHHHHHHCCEEE
T ss_conf             59878971572699997475046888888999999999999986078668555279999743465231687663151598


Q ss_pred             ECCCCC-C-CEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCEECC
Q ss_conf             244336-8-3699999960433322046876763574188898543546436
Q gi|254780321|r  439 IDMSHL-D-NRAMIVYELPLNEVIFDFYDRLKSVSKGYASFDYNVIDYRDSD  488 (606)
Q Consensus       439 ~~m~~~-~-~~~~i~~~vPl~Eli~~f~~~LkS~T~G~as~~ye~~~Y~~~d  488 (606)
T Consensus       630 ~~~~~~~~~~~~~i~A~vPl~Em-fgya~dLRs~T~Gra~~~m~f~~y~~vp  680 (697)
T COG0480         630 LGMEQRPGGGLDVIKAEVPLAEM-FGYATDLRSATQGRASFSMEFDHYEEVP  680 (697)
T ss_pred             ECCEECCCCCEEEEEEEECHHHH-CCCHHHHHHHCCCCEEEEEEECCCEECC
T ss_conf             43042268845999998366885-4533666754568616999735127378