HHsearch alignment for GI: 254780321 and conserved domain: COG0480
>COG0480 FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=838.56 Aligned_cols=467 Identities=34% Similarity=0.527 Sum_probs=415.2
Q ss_pred CCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCC---CCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEE
Q ss_conf 9852531799980138987788999999829805444---4311305867798719505232799997437884389999
Q gi|254780321|r 6 TPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTERE---MSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNL 82 (606)
Q Consensus 6 ~p~~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~---~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNl 82 (606)
T Consensus 5 ~~~~~~RNigI~aHidaGKTTltE~lL~~tG~i~k~G~v~~g~~~~D~~e~EqeRGITI~saa~s~~~~~----~~~iNl 80 (697)
T COG0480 5 MPLERIRNIGIVAHIDAGKTTLTERILFYTGIISKIGEVHDGAATMDWMEQEQERGITITSAATTLFWKG----DYRINL 80 (697)
T ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEECC----CEEEEE
T ss_conf 5544540799996047880778899998759757785566786547887889866977864056899708----658999
Q ss_pred EECCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH--
Q ss_conf 617873002799999997302689999868788655899999999709967998326788753211338887755532--
Q gi|254780321|r 83 IDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGI-- 160 (606)
Q Consensus 83 IDTPGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~-- 160 (606)
T Consensus 81 IDTPGHVDFt~EV~rslrvlDgavvVvdaveGV~~QTEtv~rqa~~~~vp~i~fiNKmDR~~a~~~~~~~~l~~~l~~~~ 160 (697)
T COG0480 81 IDTPGHVDFTIEVERSLRVLDGAVVVVDAVEGVEPQTETVWRQADKYGVPRILFVNKMDRLGADFYLVVEQLKERLGANP 160 (697)
T ss_pred ECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEECHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 57997353477879988861650999988788300379999998655997599997843355673350999999867983
Q ss_pred ---------------------------H-----------H--------------------H-------------------
Q ss_conf ---------------------------2-----------3--------------------2-------------------
Q gi|254780321|r 161 ---------------------------S-----------T--------------------E------------------- 163 (606)
Q Consensus 161 ---------------------------~-----------~--------------------~------------------- 163 (606)
T Consensus 161 ~~v~~pIg~~~~f~g~idl~~~~~~~~~~~~~~~~~~ip~~~~~~~~e~r~~~~e~i~e~de~l~e~yl~g~e~~~~~i~ 240 (697)
T COG0480 161 VPVQLPIGAEEEFEGVIDLVEMKAVAFGDGAKYEWIEIPADLKEIAEEAREKLLEALAEFDEELMEKYLEGEEPTEEEIK 240 (697)
T ss_pred EEEECCCCCCCCCCCEEEHHHCCEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHH
T ss_conf 22321115730047636711067179757752431558778876789999999998861579999998668876479999
Q ss_pred -------------HHHHHHHHCCCCCCHHHHHHHHHHHCCCCH------------------HHHHCCCCCCCCCEEECCC
Q ss_conf -------------100011100223200678776321000111------------------1220123310121011475
Q gi|254780321|r 164 -------------DALLVSAKTGEGIPLLLERIVQQLPSPTSP------------------EGANAPLKALLIDSWYNSY 212 (606)
Q Consensus 164 -------------~ii~vSAktG~GV~~LLd~Iv~~iP~P~~~------------------~~~~~Pl~alVfds~~D~~ 212 (606)
T Consensus 241 ~~i~~~~~~~~~~pvl~gsa~kn~gv~~lLdav~~~lPsP~e~~~~~g~~~~~~~~~~~~~~~~e~p~~a~vfKi~~d~~ 320 (697)
T COG0480 241 KALRKGTIAGKIVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDVPPIKGDLDDEIEKAVLRKASDEGPLSALVFKIMTDPF 320 (697)
T ss_pred HHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCC
T ss_conf 99987653266256775010257757999999998789956645444767753230000468888865999999686487
Q ss_pred CCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CEEEEHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 725999981698735584588733556421012223355-4124010124712332201100244445420004667853
Q gi|254780321|r 213 LGVMVLVRIINGQLTKGQSIRLMGTNAKYQVERIGILTP-KMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTT 291 (606)
Q Consensus 213 ~G~I~~~RV~sG~lk~Gd~I~~~~~g~~~~v~~ig~~~~-~~~~v~~l~aGdVG~ii~gik~l~~~~vGDTl~~~~~p~~ 291 (606)
T Consensus 321 ~g~l~~~RvysGtl~~G~~v~n~~~~~~erv~~l~~~~~~~~~~v~~~~AG~I~a----~~Gl~~~~tGdTl~~~~~~-- 394 (697)
T COG0480 321 VGKLTFVRVYSGTLKSGSEVLNSTKGKKERVGRLLLMHGNEREEVDEVPAGDIVA----LVGLKDATTGDTLCDENKP-- 394 (697)
T ss_pred CCEEEEEEEECCEECCCCEEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCEEE----EECCCCCCCCCEEECCCCC--
T ss_conf 8759999986437737988995799853787789871689502605405764899----9752355407856537876--
Q ss_pred CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCC
Q ss_conf 236455222212664212677024578899998886411221112--567600042028996376789888988866449
Q gi|254780321|r 292 SALPGFKPIQPVVFCGLFPVDATQFENLRTAINKLRLNDASFSFE--LENSTALGFGFRCGFLGLLHLEIIQERLEREFS 369 (606)
Q Consensus 292 ~~Lp~~~~~~P~v~~~i~p~~~~d~~~L~~aL~kL~~~D~sl~~e--~Ets~aLg~Gfr~gglG~LHLeVi~eRL~rEfg 369 (606)
T Consensus 395 v~~~~~~~pePVi~vavepk~~~d~~Kl~~aL~~l~~eDPt~~v~~d~Etge~i-----IsGmGELHLei~~drl~~~~~ 469 (697)
T COG0480 395 VILESMEFPEPVISVAVEPKTKADQEKLSEALNKLAEEDPTFRVETDEETGETI-----ISGMGELHLEIIVDRLKREFG 469 (697)
T ss_pred CCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE-----EEECCHHHHHHHHHHHHHHCC
T ss_conf 465665479964899976788435899999999877538845899817766189-----982655549999998776419
Q ss_pred CEEEEECCCCCEE-------------------------------------------------------------------
Q ss_conf 5069737823303-------------------------------------------------------------------
Q gi|254780321|r 370 LNLIGTSPSVVYE------------------------------------------------------------------- 382 (606)
Q Consensus 370 ~ev~~t~P~V~Yk------------------------------------------------------------------- 382 (606)
T Consensus 470 vev~~~~PqV~YrETi~~~~~~~~~~~kqsgg~~q~~~v~i~~EP~~~~~~~~f~~~i~~g~~P~~yi~~ve~G~~~a~~ 549 (697)
T COG0480 470 VEVEVGKPQVAYRETIRKKSEVEGKHKKQSGGPGQYGHVYIEIEPLEDGSGFEFVDKIVGGVVPKEYIPAVEKGFREALK 549 (697)
T ss_pred CEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 25893498168886614665430345303688985537999997589876417750005576726654778999999985
Q ss_pred -------------EEEECCCEEECCC-HHHCCCHHHHH----------HHHCCEEEEEEEECCCCCHHHHHHHHHHHHEE
Q ss_conf -------------3531564541269-66625867788----------86232699999808310003899988630014
Q gi|254780321|r 383 -------------LYMHDGSMQKLSN-PIDMPEVTKIA----------ELREPWIQVTIITPNEYLGSILKLCQERRGIQ 438 (606)
Q Consensus 383 -------------v~~~dG~~~~Vd~-p~~~p~~~~i~----------~i~EPi~~~~I~~P~ey~G~Vm~~l~~RRG~~ 438 (606)
T Consensus 550 ~GpLag~pv~dvkv~L~dgs~h~vdss~~af~~a~~~a~~~a~~~a~P~lLEPi~~veI~~P~d~~G~V~~~l~~rRG~I 629 (697)
T COG0480 550 SGPLAGYPVVDVKVTLLDGSYHEVDSSEMAFKIAASLAFKEAMLKAKPVLLEPIMKVEITTPEEYMGDVIGDLNSRRGQI 629 (697)
T ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCHHHHCHHHHHHHHCCEEE
T ss_conf 59878971572699997475046888888999999999999986078668555279999743465231687663151598
Q ss_pred ECCCCC-C-CEEEEEEEECHHHHHHHHHHHHHHHCCCEEEEEEEECCCEECC
Q ss_conf 244336-8-3699999960433322046876763574188898543546436
Q gi|254780321|r 439 IDMSHL-D-NRAMIVYELPLNEVIFDFYDRLKSVSKGYASFDYNVIDYRDSD 488 (606)
Q Consensus 439 ~~m~~~-~-~~~~i~~~vPl~Eli~~f~~~LkS~T~G~as~~ye~~~Y~~~d 488 (606)
T Consensus 630 ~~~~~~~~~~~~~i~A~vPl~Em-fgya~dLRs~T~Gra~~~m~f~~y~~vp 680 (697)
T COG0480 630 LGMEQRPGGGLDVIKAEVPLAEM-FGYATDLRSATQGRASFSMEFDHYEEVP 680 (697)
T ss_pred ECCEECCCCCEEEEEEEECHHHH-CCCHHHHHHHCCCCEEEEEEECCCEECC
T ss_conf 43042268845999998366885-4533666754568616999735127378