HHsearch alignment for GI: 254780321 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.12 E-value=9.3e-10 Score=84.98 Aligned_cols=152 Identities=28% Similarity=0.363 Sum_probs=101.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCC---
Q ss_conf 79998013898778899999982980544443113058677987195052327999974378843899996178730---
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHV--- 89 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~--- 89 (606)
T Consensus 219 kvvIiG~PNvGKSSLLNaL~~~d~AIVTdI~--------------GTTR--Dviee~i---~i~G~pv~l~DTAGiRet~ 279 (454)
T COG0486 219 KVVIIGRPNVGKSSLLNALLGRDRAIVTDIA--------------GTTR--DVIEEDI---NLNGIPVRLVDTAGIRETD 279 (454)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEECCCC--------------CCCC--CEEEEEE---EECCEEEEEEECCCCCCCC
T ss_conf 4999879988679999988667866742899--------------9741--0378999---9898899998567766673
Q ss_pred HHH--HHHHHHHH---HCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 027--99999997---3026899998687886558999999997099679983267887532113388877555322321
Q gi|254780321|r 90 DFT--YEVSRSLS---ACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTED 164 (606)
Q Consensus 90 DF~--~EV~r~l~---a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ 164 (606)
T Consensus 280 d~VE~iGIeRs~~~i~~ADlvL~v~D~~~~~~~~d~~~~~-~~~~~~~~i~v~NK~DL~~~~~~~~~----~~--~~~~~ 352 (454)
T COG0486 280 DVVERIGIERAKKAIEEADLVLFVLDASQPLDKEDLALIE-LLPKKKPIIVVLNKADLVSKIELESE----KL--ANGDA 352 (454)
T ss_pred CHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHH-HCCCCCCEEEEEECHHCCCCCCCCHH----HC--CCCCC
T ss_conf 4899999999999998599899997088777601177887-24368977999960211564321012----02--67882
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 00011100223200678776321000
Q gi|254780321|r 165 ALLVSAKTGEGIPLLLERIVQQLPSP 190 (606)
Q Consensus 165 ii~vSAktG~GV~~LLd~Iv~~iP~P 190 (606)
T Consensus 353 ~i~iSa~t~~Gl~~L~~~i~~~~~~~ 378 (454)
T COG0486 353 IISISAKTGEGLDALREAIKQLFGKG 378 (454)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 69998257657999999999998630