HHsearch alignment for GI: 254780321 and conserved domain: PRK12312

>PRK12312 infB translation initiation factor IF-2; Provisional.
Probab=100.00  E-value=2.1e-44  Score=317.61  Aligned_cols=424  Identities=21%  Similarity=0.304  Sum_probs=275.2

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf             79998013898778899999982980544443113058677987195052327999974378843899996178730027
Q gi|254780321|r   13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFT   92 (606)
Q Consensus        13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~   92 (606)
T Consensus       119 vVtimGHVDHGKTsLLD~iR-~t~-V~~~EaG-------------GITQhIGA~~v~~-----~~~~itFiDTPGHeAFt  178 (610)
T PRK12312        119 IVTIMGHVDHGKTTLLDTIR-KTN-VVASEAG-------------GITQHIGAYQVEY-----QGKKITFIDTPGHEAFT  178 (610)
T ss_pred             EEEEECCCCCCHHHHHHHHH-CCC-CCCCCCC-------------CCCCEECEEEEEE-----CCCEEEEECCCCHHHHH
T ss_conf             89996772577225889985-486-4134677-------------6644004499986-----79768997289679899


Q ss_pred             HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH------HH
Q ss_conf             999999973026899998687886558999999997099679983267887532113388877555322321------00
Q gi|254780321|r   93 YEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTED------AL  166 (606)
Q Consensus        93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~------ii  166 (606)
T Consensus       179 ~mR~RGa~vtDI~iLVVaaddGv~pQTiEaI~~ak~a~vpiiVAiNKiDkp~a~~~~v~~~L~~-~g~~~E~~GGdv~~V  257 (610)
T PRK12312        179 EMRARGAKVTDIVILVVAADDGVKPQTEEAIDHAKAANVPIIVFVNKMDKPNANPDRIKNELSK-YDLVPEEWGGDTPFV  257 (610)
T ss_pred             HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHH-HCCCHHHHCCCCEEE
T ss_conf             9997077654579999975789774269999999975998899850446788987899999987-076678857944599


Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf             01110022320067877632100011112201233101210114757259999816987355845887335564210122
Q gi|254780321|r  167 LVSAKTGEGIPLLLERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAKYQVERI  246 (606)
Q Consensus       167 ~vSAktG~GV~~LLd~Iv~~iP~P~~~~~~~~Pl~alVfds~~D~~~G~I~~~RV~sG~lk~Gd~I~~~~~g~~~~v~~i  246 (606)
T Consensus       258 ~iSAktg~GId~LLe~IlL~AE~leLka~~~~~a~G~VIEsk~dkg~G~vatviVq~GtLk~GD~iV~G~~~G--kVRa-  334 (610)
T PRK12312        258 YGSALKNEGIDELLDSILLLAEILNLKANPNRLAIGTVIEAKLDKGKGPVATLIVQNGTLKVGDFIVAGSTYG--KIRS-  334 (610)
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEEECCCEEEECCCCC--CCCE-
T ss_conf             9036879899999999999999876522789860699999786168763689998358781599899898668--6215-


Q ss_pred             CCCCCCEEEEHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCC-CCC----------------------CCCCC-CCC
Q ss_conf             233554124010124712332201100244445420004667853-236----------------------45522-221
Q gi|254780321|r  247 GILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTT-SAL----------------------PGFKP-IQP  302 (606)
Q Consensus       247 g~~~~~~~~v~~l~aGdVG~ii~gik~l~~~~vGDTl~~~~~p~~-~~L----------------------p~~~~-~~P  302 (606)
T Consensus       335 -m~d~~g~~lk~A~PS~pV-~I~Gl~~v--P~aGd~~~vv~~Ek~Ak~ia~~r~~~~~~~~~~~~~~e~~~~~~~~~~~k  410 (610)
T PRK12312        335 -MEDENGKKLKKALPSTPV-KVSGLNEV--PQAGDKFIVFNDEKFAKKIANEKKQKQKQNELKSLQLEDIKQNIDSGELK  410 (610)
T ss_pred             -EECCCCCCCCCCCCCCCE-EEECCCCC--CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             -773678614341799857-98467567--56797699728899999999999999999887440088899886336751


Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCC--------------CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHC
Q ss_conf             2664212677024578899998886411221112--------------56760004202899637678988898886644
Q gi|254780321|r  303 VVFCGLFPVDATQFENLRTAINKLRLNDASFSFE--------------LENSTALGFGFRCGFLGLLHLEIIQERLEREF  368 (606)
Q Consensus       303 ~v~~~i~p~~~~d~~~L~~aL~kL~~~D~sl~~e--------------~Ets~aLg~Gfr~gglG~LHLeVi~eRL~rEf  368 (606)
T Consensus       411 ~l~vIIKADv~GSlEAI~~sL~kl~~~eV~i~Ii~agVG~ItesDV~LA~as~AiIigFNV~~------~~~a~~~A~~~  484 (610)
T PRK12312        411 ELNIIIKADVQGSLEAIKGIISKINVSGVKINIIRAAVGTISESDILLAQTSNSIIIGFNVKP------SAIIKKLAESQ  484 (610)
T ss_pred             EEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCC------CHHHHHHHHHC
T ss_conf             233799846676499999998656886435778633457776889999986699189973768------87799987744


Q ss_pred             CCEEEEECCCCCEEEEEECCCEEECCCHHHCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHEEECCCC-----
Q ss_conf             950697378233033531564541269666258677888623269999980831000389998863001424433-----
Q gi|254780321|r  369 SLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITPNEYLGSILKLCQERRGIQIDMSH-----  443 (606)
Q Consensus       369 g~ev~~t~P~V~Ykv~~~dG~~~~Vd~p~~~p~~~~i~~i~EPi~~~~I~~P~ey~G~Vm~~l~~RRG~~~~m~~-----  443 (606)
T Consensus       485 gV~Ir~y--~IIY~Li--Ddv------------k~~m~g~L~p~~~E~~iG~AeV~-~vF~--~sk~g~IAGc~V~~G~i  545 (610)
T PRK12312        485 GIKIRSH--NIIYKII--EEI------------EKILKGMLDPVYEEVVIGQAEVR-KLFK--HSKVGTIAGCYVTSGKV  545 (610)
T ss_pred             CCCEEEE--CHHHHHH--HHH------------HHHHHCCCCCCEEEEEEEEEEEE-EEEE--CCCCEEEEEEEEEECEE
T ss_conf             8626984--2288899--999------------99984589972479998999988-8886--48861789999974689


Q ss_pred             -CCCE------EEEEEEECHHHHHHHHHHHHHHHCCCE--EEEEEEECCCEECCEE
Q ss_conf             -6836------999999604333220468767635741--8889854354643667
Q gi|254780321|r  444 -LDNR------AMIVYELPLNEVIFDFYDRLKSVSKGY--ASFDYNVIDYRDSDLV  490 (606)
Q Consensus       444 -~~~~------~~i~~~vPl~Eli~~f~~~LkS~T~G~--as~~ye~~~Y~~~dlv  490 (606)
T Consensus       546 ~r~~~vRVlR~~~vI~eG~I~SL-rr~KddVkEV~~G~ECGI~l~~f~di~~GDiI  600 (610)
T PRK12312        546 KRNAKVRVIRNGKVIHEGKIASL-KHLKDDVKEVEKGKECGIHIKNFNDIKENDII  600 (610)
T ss_pred             EECCEEEEEECCEEEEEEEEHHH-HHCCCCCCHHCCCCCCEEEECCCCCCCCCCEE
T ss_conf             71984899889999997167774-02010211205895324883273568769899