HHsearch alignment for GI: 254780321 and conserved domain: PRK13948

>PRK13948 shikimate kinase; Provisional.
Probab=94.27  E-value=0.43  Score=26.79  Aligned_cols=154  Identities=16%  Similarity=0.169  Sum_probs=79.9

Q ss_pred             CCCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCH-HHHHHCCEEEEEEEEEEEECCCCCEEE
Q ss_conf             9888998525317999801389877889999998298054444311305867-798719505232799997437884389
Q gi|254780321|r    1 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMD-IERERGITIKAQTVRLNYTSTDAKDYQ   79 (606)
Q Consensus         1 ~~~~~~p~~~IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~-~EreRGITIka~~~~~~~~~~~~~~y~   79 (606)
T Consensus         1 ~~~~~~p-~~~~~IvLIG~mGsGKStiGk~LA~~l~--------~~fiD~D~~Ie~~~g~sI-----~e-----------   55 (182)
T PRK13948          1 MARLEVP-RPATFVALAGFMGTGKSRIGWELSRALA--------LHFVDTDKLITRVVGKSI-----PE-----------   55 (182)
T ss_pred             CCCCCCC-CCCCCEEEECCCCCCHHHHHHHHHHHHC--------CCEEECHHHHHHHHCCCH-----HH-----------
T ss_conf             9866579-9998189889999988999999999969--------598888499999889399-----99-----------


Q ss_pred             EEEEECCCCCHHHHHHHHHHH---HCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEC-----------CCCCCCC
Q ss_conf             999617873002799999997---30268999986878865589999999970996799832-----------6788753
Q gi|254780321|r   80 LNLIDTPGHVDFTYEVSRSLS---ACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLN-----------KADLPSA  145 (606)
Q Consensus        80 iNlIDTPGH~DF~~EV~r~l~---a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viN-----------KiD~~~A  145 (606)
T Consensus        56 --IF~~~GE~~FR~~E~~~l~~l~~~~~--~VIStGGG~v-~~~~n~~~l~~~g--~vv~L~~~~~~i~~R~~~~~RPll  128 (182)
T PRK13948         56 --VFAQEGEEYFRACEKEVVRRVTRLDY--AVISLGGGTF-IHEENRRALLGRG--PVVVLWASPETVYQRTKHSDRPLL  128 (182)
T ss_pred             --HHHHHCHHHHHHHHHHHHHHHHCCCC--EEEECCCCEE-CCHHHHHHHHHCC--EEEEEECCHHHHHHHCCCCCCCCC
T ss_conf             --99984899999999999999974799--6997588500-5899999999689--899996999999988178999988


Q ss_pred             CCCCHHHHHHHHHH----HH--HHHHHHHHHHCCCCCCHHHHHHHHHHHC
Q ss_conf             21133888775553----22--3210001110022320067877632100
Q gi|254780321|r  146 DPDRVKKQIEETIG----IS--TEDALLVSAKTGEGIPLLLERIVQQLPS  189 (606)
Q Consensus       146 ~~e~v~~ei~~~~g----~~--~~~ii~vSAktG~GV~~LLd~Iv~~iP~  189 (606)
T Consensus       129 ~~~~~~~~l~~l~~eR~~~Y~~A~~~I~t---d~~~~~eiv~~Ii~~L~a  175 (182)
T PRK13948        129 QVEDPLERIRTLMEEREPVYRQGTIHVHS---DGRPVEEIVEEVVERLWA  175 (182)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCEEEEC---CCCCHHHHHHHHHHHHHH
T ss_conf             89987999999999999999967889889---989999999999999999