HHsearch alignment for GI: 254780321 and conserved domain: TIGR03594
>TIGR03594 GTPase_EngA ribosome-associated GTPase EngA. EngA (YfgK, Der) is a ribosome-associated essential GTPase with a duplication of its GTP-binding domain. It is broadly to universally distributed among bacteria. It appears to function in ribosome biogenesis or stability.
Probab=99.72 E-value=1.6e-16 Score=130.32 Aligned_cols=155 Identities=25% Similarity=0.305 Sum_probs=114.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCH---
Q ss_conf 99980138987788999999829805444431130586779871950523279999743788438999961787300---
Q gi|254780321|r 14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVD--- 90 (606)
Q Consensus 14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~D--- 90 (606)
T Consensus 2 VaIvGrpNVGKStLfN~L~~~~~aIv~~--------------~~G~TRD~~~~~~~-----~~~~~~~liDT~G~~~~~~ 62 (429)
T TIGR03594 2 VAIVGRPNVGKSTLFNRLTGKRDAIVAD--------------TPGVTRDRKYGDAE-----WGGREFILIDTGGIEEDDD 62 (429)
T ss_pred EEEECCCCCCHHHHHHHHHCCCEEECCC--------------CCCCCCCCEEEEEE-----ECCEEEEEEECCCCCCCCH
T ss_conf 8999999987899999987886176159--------------89988773379999-----9990799998989898743
Q ss_pred -H----HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -2----79999999730268999986878865589999999970996799832678875321133888775553223210
Q gi|254780321|r 91 -F----TYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDA 165 (606)
Q Consensus 91 -F----~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~i 165 (606)
T Consensus 63 ~~~~~~~~q~~~ai~~aDlIlfVvD~~~git~~D~~i~~~Lrk~~k~vilviNK~D~~~--~~~~---~~ef~~LG~~~~ 137 (429)
T TIGR03594 63 GLDKQIREQAEIAIEEADVILFVVDGREGLTPEDEEIAKWLRKSGKPVILVANKIDGKK--EDAV---AAEFYSLGFGEP 137 (429)
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC--HHHH---HHHHHHHCCCCE
T ss_conf 78999999999999867999999857768986799999999871997899998346753--1456---999998368986
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 001110022320067877632100011
Q gi|254780321|r 166 LLVSAKTGEGIPLLLERIVQQLPSPTS 192 (606)
Q Consensus 166 i~vSAktG~GV~~LLd~Iv~~iP~P~~ 192 (606)
T Consensus 138 i~iSA~h~~Gi~~L~~~i~~~l~~~~~ 164 (429)
T TIGR03594 138 IPISAEHGRGIGDLLDAILELLPEEEE 164 (429)
T ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCC
T ss_conf 887420467999999999965886655