HHsearch alignment for GI: 254780321 and conserved domain: cd01868
>cd01868 Rab11_like Rab11-like. Rab11a, Rab11b, and Rab25 are closely related, evolutionary conserved Rab proteins that are differentially expressed. Rab11a is ubiquitously synthesized, Rab11b is enriched in brain and heart and Rab25 is only found in epithelia. Rab11/25 proteins seem to regulate recycling pathways from endosomes to the plasma membrane and to the trans-Golgi network. Furthermore, Rab11a is thought to function in the histamine-induced fusion of tubulovesicles containing H+, K+ ATPase with the plasma membrane in gastric parietal cells and in insulin-stimulated insertion of GLUT4 in the plasma membrane of cardiomyocytes. Overexpression of Rab25 has recently been observed in ovarian cancer and breast cancer, and has been correlated with worsened outcomes in both diseases. In addition, Rab25 overexpression has also been observed in prostate cancer, transitional cell carcinoma of the bladder, and invasive breast tumor cells. GTPase activating proteins (GAPs) interact with GTP
Probab=99.42 E-value=9.6e-12 Score=98.33 Aligned_cols=156 Identities=20% Similarity=0.270 Sum_probs=99.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf 79998013898778899999982980544443113058677987195052327999974378843899996178730027
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFT 92 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~ 92 (606)
T Consensus 5 Kiv~iGd~~VGKTsli~r~~--~~~f~~~~-~~T----------ig~~~~~k--~i~---~~~~~~~l~iwDtaG~e~~~ 66 (165)
T cd01868 5 KIVLIGDSGVGKSNLLSRFT--RNEFNLDS-KST----------IGVEFATR--SIQ---IDGKTIKAQIWDTAGQERYR 66 (165)
T ss_pred EEEEECCCCCCHHHHHHHHH--HCCCCCCC-CCC----------CCEEEEEE--EEE---ECCEEEEEEEEECCCCHHHH
T ss_conf 99999999978999999997--29899988-987----------44787899--999---99999999999899972126
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHH-H---CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997302689999868788655899999999-7---0996799832678875321133888775553223210001
Q gi|254780321|r 93 YEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAI-D---NNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLV 168 (606)
Q Consensus 93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~-~---~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ii~v 168 (606)
T Consensus 67 ~~~~~~~~~a~~~ilvydit~~~Sf~~i~~w~~~i~~~~~~~~~iilVgnK~DL~~~r~-Vs~~e~~~~a~~~~~~~~E~ 145 (165)
T cd01868 67 AITSAYYRGAVGALLVYDITKKQTFENVERWLKELRDHADSNIVIMLVGNKSDLRHLRA-VPTEEAKAFAEKNGLSFIET 145 (165)
T ss_pred HHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCC-CCHHHHHHHHHHCCCEEEEE
T ss_conf 78998733205148986269889999999999999985557735987023478688578-88999999999859979996
Q ss_pred HHHCCCCCCHHHHHHHHHH
Q ss_conf 1100223200678776321
Q gi|254780321|r 169 SAKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 169 SAktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 146 SAk~g~nV~e~F~~l~~~i 164 (165)
T cd01868 146 SALDGTNVEEAFKQLLTEI 164 (165)
T ss_pred CCCCCCCHHHHHHHHHHHH
T ss_conf 7888929899999999986