HHsearch alignment for GI: 254780321 and conserved domain: cd01885
>cd01885 EF2 EF2 (for archaea and eukarya). Translocation requires hydrolysis of a molecule of GTP and is mediated by EF-G in bacteria and by eEF2 in eukaryotes. The eukaryotic elongation factor eEF2 is a GTPase involved in the translocation of the peptidyl-tRNA from the A site to the P site on the ribosome. The 95-kDa protein is highly conserved, with 60% amino acid sequence identity between the human and yeast proteins. Two major mechanisms are known to regulate protein elongation and both involve eEF2. First, eEF2 can be modulated by reversible phosphorylation. Increased levels of phosphorylated eEF2 reduce elongation rates presumably because phosphorylated eEF2 fails to bind the ribosomes. Treatment of mammalian cells with agents that raise the cytoplasmic Ca2+ and cAMP levels reduce elongation rates by activating the kinase responsible for phosphorylating eEF2. In contrast, treatment of cells with insulin increases elongation rates by promoting eEF2 dephosphorylation. Seco
Probab=100.00 E-value=0 Score=386.41 Aligned_cols=179 Identities=39% Similarity=0.652 Sum_probs=154.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC-CCEEECCCHHHHHHCCEEEEEEEEEEEE-----CCCCCEEEEEEEEC
Q ss_conf 17999801389877889999998298054444-3113058677987195052327999974-----37884389999617
Q gi|254780321|r 12 RNFSIVAHIDHGKSTLADRFIQHCRGLTEREM-SSQVLDNMDIERERGITIKAQTVRLNYT-----STDAKDYQLNLIDT 85 (606)
Q Consensus 12 RN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~-~~~vlD~~~~EreRGITIka~~~~~~~~-----~~~~~~y~iNlIDT 85 (606)
T Consensus 1 RNi~iigHvdhGKTTL~D~Ll~~~g~i~~~~~g~~~~~D~~~~E~eRgiTIks~~isl~~~~~~~~~~~~~~~~inlIDT 80 (222)
T cd01885 1 RNICIIAHVDHGKTTLSDSLLASAGIISEKLAGKARYMDSREDEQERGITMKSSAISLYFEYEEEDKADGNEYLINLIDS 80 (222)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCHHCCCCEEECCCHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf 96999866887799999999998598412106634651424334205415862268999860344345688638999728
Q ss_pred CCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----CCCCCCHH-------HHH
Q ss_conf 8730027999999973026899998687886558999999997099679983267887----53211338-------887
Q gi|254780321|r 86 PGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLP----SADPDRVK-------KQI 154 (606)
Q Consensus 86 PGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~----~A~~e~v~-------~ei 154 (606)
T Consensus 81 PGH~dF~~ev~~al~~~DgailVVDa~eGv~~qT~~vl~~a~~~~l~~il~iNKiDRli~el~l~p~day~~l~~iie~v 160 (222)
T cd01885 81 PGHVDFSSEVTAALRLCDGALVVVDAVEGVCVQTETVLRQALKERVKPVLVINKIDRLILELKLSPEEAYQRLARIIEQV 160 (222)
T ss_pred CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHH
T ss_conf 85698999999999856817996104578577899999999985999799998903650011799899999999999999
Q ss_pred HHHHH----------------HHH--HHHHHHHHHCCCCC--------CHHHHHHHHHHHCC
Q ss_conf 75553----------------223--21000111002232--------00678776321000
Q gi|254780321|r 155 EETIG----------------IST--EDALLVSAKTGEGI--------PLLLERIVQQLPSP 190 (606)
Q Consensus 155 ~~~~g----------------~~~--~~ii~vSAktG~GV--------~~LLd~Iv~~iP~P 190 (606)
T Consensus 161 N~~i~~~~~~~~~~~~~~~~~~~p~~gnV~f~Sa~~Gw~f~l~~fa~ly~ll~~iv~~iP~P 222 (222)
T cd01885 161 NAIIGTYADEEFKEKDDEKWYFSPQKGNVAFGSALHGWGFTIIKFARIYAVLEMVVKHLPSP 222 (222)
T ss_pred HHHHHHHCHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 99998723043303553210207777838999832377126754121899999999628998