HHsearch alignment for GI: 254780321 and conserved domain: cd01885

>cd01885 EF2 EF2 (for archaea and eukarya). Translocation requires hydrolysis of a molecule of GTP and is mediated by EF-G in bacteria and by eEF2 in eukaryotes. The eukaryotic elongation factor eEF2 is a GTPase involved in the translocation of the peptidyl-tRNA from the A site to the P site on the ribosome. The 95-kDa protein is highly conserved, with 60% amino acid sequence identity between the human and yeast proteins. Two major mechanisms are known to regulate protein elongation and both involve eEF2. First, eEF2 can be modulated by reversible phosphorylation. Increased levels of phosphorylated eEF2 reduce elongation rates presumably because phosphorylated eEF2 fails to bind the ribosomes. Treatment of mammalian cells with agents that raise the cytoplasmic Ca2+ and cAMP levels reduce elongation rates by activating the kinase responsible for phosphorylating eEF2. In contrast, treatment of cells with insulin increases elongation rates by promoting eEF2 dephosphorylation. Seco
Probab=100.00  E-value=0  Score=386.41  Aligned_cols=179  Identities=39%  Similarity=0.652  Sum_probs=154.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC-CCEEECCCHHHHHHCCEEEEEEEEEEEE-----CCCCCEEEEEEEEC
Q ss_conf             17999801389877889999998298054444-3113058677987195052327999974-----37884389999617
Q gi|254780321|r   12 RNFSIVAHIDHGKSTLADRFIQHCRGLTEREM-SSQVLDNMDIERERGITIKAQTVRLNYT-----STDAKDYQLNLIDT   85 (606)
Q Consensus        12 RN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~-~~~vlD~~~~EreRGITIka~~~~~~~~-----~~~~~~y~iNlIDT   85 (606)
T Consensus         1 RNi~iigHvdhGKTTL~D~Ll~~~g~i~~~~~g~~~~~D~~~~E~eRgiTIks~~isl~~~~~~~~~~~~~~~~inlIDT   80 (222)
T cd01885           1 RNICIIAHVDHGKTTLSDSLLASAGIISEKLAGKARYMDSREDEQERGITMKSSAISLYFEYEEEDKADGNEYLINLIDS   80 (222)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCCHHCCCCEEECCCHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf             96999866887799999999998598412106634651424334205415862268999860344345688638999728


Q ss_pred             CCCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC----CCCCCCHH-------HHH
Q ss_conf             8730027999999973026899998687886558999999997099679983267887----53211338-------887
Q gi|254780321|r   86 PGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLP----SADPDRVK-------KQI  154 (606)
Q Consensus        86 PGH~DF~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~----~A~~e~v~-------~ei  154 (606)
T Consensus        81 PGH~dF~~ev~~al~~~DgailVVDa~eGv~~qT~~vl~~a~~~~l~~il~iNKiDRli~el~l~p~day~~l~~iie~v  160 (222)
T cd01885          81 PGHVDFSSEVTAALRLCDGALVVVDAVEGVCVQTETVLRQALKERVKPVLVINKIDRLILELKLSPEEAYQRLARIIEQV  160 (222)
T ss_pred             CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHH
T ss_conf             85698999999999856817996104578577899999999985999799998903650011799899999999999999


Q ss_pred             HHHHH----------------HHH--HHHHHHHHHCCCCC--------CHHHHHHHHHHHCC
Q ss_conf             75553----------------223--21000111002232--------00678776321000
Q gi|254780321|r  155 EETIG----------------IST--EDALLVSAKTGEGI--------PLLLERIVQQLPSP  190 (606)
Q Consensus       155 ~~~~g----------------~~~--~~ii~vSAktG~GV--------~~LLd~Iv~~iP~P  190 (606)
T Consensus       161 N~~i~~~~~~~~~~~~~~~~~~~p~~gnV~f~Sa~~Gw~f~l~~fa~ly~ll~~iv~~iP~P  222 (222)
T cd01885         161 NAIIGTYADEEFKEKDDEKWYFSPQKGNVAFGSALHGWGFTIIKFARIYAVLEMVVKHLPSP  222 (222)
T ss_pred             HHHHHHHCHHHHCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             99998723043303553210207777838999832377126754121899999999628998