HHsearch alignment for GI: 254780321 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.83 E-value=2.3e-19 Score=149.46 Aligned_cols=154 Identities=29% Similarity=0.439 Sum_probs=110.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCC----
Q ss_conf 7999801389877889999998298054444311305867798719505232799997437884389999617873----
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGH---- 88 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH---- 88 (606)
T Consensus 4 ~V~ivG~pN~GKSTL~N~l~---g~--~~~~---v------s~~pgtTr~~~~~~~~-----~~~~~~~~vDtpGi~~~~ 64 (174)
T cd01895 4 RIAIIGRPNVGKSSLVNALL---GE--ERVI---V------SDIAGTTRDSIDVPFE-----YDGKKYTLIDTAGIRRKG 64 (174)
T ss_pred EEEEECCCCCCHHHHHHHHH---CC--CCEE---E------CCCCCCEEECCEEEEE-----ECCEEEEEEECCCCCCCC
T ss_conf 99999899998999999983---89--8444---3------4999915733289999-----999889998578842134
Q ss_pred -----CHHHHHHHHH---HHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCC---CCCHHHHHHHH
Q ss_conf -----0027999999---973026899998687886558999999997099679983267887532---11338887755
Q gi|254780321|r 89 -----VDFTYEVSRS---LSACEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSAD---PDRVKKQIEET 157 (606)
Q Consensus 89 -----~DF~~EV~r~---l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A~---~e~v~~ei~~~ 157 (606)
T Consensus 65 ~~~~~~e~-~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~~~~~~~~~~ 143 (174)
T cd01895 65 KVEEGIEK-YSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMKEFKKEIRRK 143 (174)
T ss_pred CCCCHHHH-HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHHHHHHHHHHH
T ss_conf 42106889-99999999998428658997589899889999999999859986999856752676477899999999987
Q ss_pred HH-HHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 53-223210001110022320067877632
Q gi|254780321|r 158 IG-ISTEDALLVSAKTGEGIPLLLERIVQQ 186 (606)
Q Consensus 158 ~g-~~~~~ii~vSAktG~GV~~LLd~Iv~~ 186 (606)
T Consensus 144 ~~~~~~~~ii~iSA~~g~Gi~~L~~~I~ei 173 (174)
T cd01895 144 LPFLDYAPIVFISALTGQGVDKLFDAIDEV 173 (174)
T ss_pred HCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 341689928999744798999999999986