>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.

Probab=99.54 E-value=1.8e-13 Score=109.99 Aligned_cols=154 Identities=21% Similarity=0.269 Sum_probs=93.6 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCC---- Q ss_conf 7999801389877889999998298054444311305867798719505232799997437884389999617873---- Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGH---- 88 (606) Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH---- 88 (606) T Consensus 2 ~VAiiG~pNvGKSTLlN~l---~~~--~~~----V~~~------pgTT~~~~~g~i~~--~--~~~~i~~~DtpGi~~~~ 62 (170) T cd01898 2 DVGLVGLPNAGKSTLLSAI---SNA--KPK----IADY------PFTTLVPNLGVVRV--D--DGRSFVVADIPGLIEGA 62 (170) T ss_pred CEEEECCCCCCHHHHHHHH---HCC--CCE----EECC------CCCCCCCEEEEEEE--C--CCCEEEEECCCCCCCCC T ss_conf 5899899999899999999---678--760----3256------66523744779993--6--98569996488644455 Q ss_pred -CHH--HHHHHHHHHHCCEEEEEEECCCCCCH-HHHHHHHHHHH------CCCCEEEEECCCCCCCCCCCCHHHHHHHHH Q ss_conf -002--79999999730268999986878865-58999999997------099679983267887532113388877555 Q gi|254780321|r 89 -VDF--TYEVSRSLSACEGSLLVVDATQGVEA-QTLANVYQAID------NNHEIITVLNKADLPSADPDRVKKQIEETI 158 (606) Q Consensus 89 -~DF--~~EV~r~l~a~dgaiLvVdA~~Gvq~-QT~~~~~~A~~------~~l~~I~viNKiD~~~A~~e~v~~ei~~~~ 158 (606) T Consensus 63 ~~~~~l~~~~l~~i~~advil~vvD~~~~~~~~~~~~~i~~~l~~~~~~~~~kp~ilv~NK~Dl~~~--~~~~~~~~~~~ 140 (170) T cd01898 63 SEGKGLGHRFLRHIERTRLLLHVIDLSGDDDPVEDYKTIRNELELYNPELLEKPRIVVLNKIDLLDE--EELFELLKELL 140 (170) T ss_pred CCCCCHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHCCCH--HHHHHHHHHHH T ss_conf 4662248999861334561799998998789899999999999982744403865067762024283--56389999999 Q ss_pred H-HHHHHHHHHHHHCCCCCCHHHHHHHHHH Q ss_conf 3-2232100011100223200678776321 Q gi|254780321|r 159 G-ISTEDALLVSAKTGEGIPLLLERIVQQL 187 (606) Q Consensus 159 g-~~~~~ii~vSAktG~GV~~LLd~Iv~~i 187 (606) T Consensus 141 ~~~~~~~vi~iSA~~g~gi~~L~~~I~~~L 170 (170) T cd01898 141 KELWGKPVFPISALTGEGLDELLRKLAELL 170 (170) T ss_pred HHCCCCCEEEEECCCCCCHHHHHHHHHHHC T ss_conf 856999589997547979999999999669

HHsearch alignment for GI: 254780321 and conserved domain: cd01898