HHsearch alignment for GI: 254780321 and conserved domain: cd04129

>cd04129 Rho2 Rho2 subfamily. Rho2 is a fungal GTPase that plays a role in cell morphogenesis, control of cell wall integrity, control of growth polarity, and maintenance of growth direction. Rho2 activates the protein kinase C homolog Pck2, and Pck2 controls Mok1, the major (1-3) alpha-D-glucan synthase. Together with Rho1 (RhoA), Rho2 regulates the construction of the cell wall. Unlike Rho1, Rho2 is not an essential protein, but its overexpression is lethal. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for proper intracellular localization via membrane attachment. As with other Rho family GTPases, the GDP/GTP cycling is regulated by GEFs (guanine nucleotide exchange factors), GAPs (GTPase-activating proteins) and GDIs (guanine nucleotide dissociation inhibitors).
Probab=99.10  E-value=2.3e-09  Score=82.33  Aligned_cols=154  Identities=25%  Similarity=0.266  Sum_probs=97.6

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEE-EEEEEEECCCCCEEEEEEEECCCCCH
Q ss_conf             17999801389877889999998298054444311305867798719505232-79999743788438999961787300
Q gi|254780321|r   12 RNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQ-TVRLNYTSTDAKDYQLNLIDTPGHVD   90 (606)
Q Consensus        12 RN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~-~~~~~~~~~~~~~y~iNlIDTPGH~D   90 (606)
T Consensus         2 ~KivllGd~~VGKTsLi~r~~--~~~f~~~y-~--------------pTi~~~~~~~i---~v~~~~v~l~iwDTaG~e~   61 (187)
T cd04129           2 RKLVIVGDGACGKTSLLSVFT--LGEFPEEY-H--------------PTVFENYVTDC---RVDGKPVQLALWDTAGQEE   61 (187)
T ss_pred             EEEEEECCCCCCHHHHHHHHH--HCCCCCCC-C--------------CCEEEEEEEEE---EECCEEEEEEEEECCCCCC
T ss_conf             199999989976899999998--29899987-8--------------86678989999---9999999999997888703


Q ss_pred             HHHHHHHHHHHCCEEEEEEECCCCCCHHHHHH----HHH-HHH--CCCCEEEEECCCCCCCCCC-------CC-HH-H--
Q ss_conf             27999999973026899998687886558999----999-997--0996799832678875321-------13-38-8--
Q gi|254780321|r   91 FTYEVSRSLSACEGSLLVVDATQGVEAQTLAN----VYQ-AID--NNHEIITVLNKADLPSADP-------DR-VK-K--  152 (606)
Q Consensus        91 F~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~----~~~-A~~--~~l~~I~viNKiD~~~A~~-------e~-v~-~--  152 (606)
T Consensus        62 ~~~~~~~~~~~a~~~ilvydi~~---~~Sf~~~~~~w~~~~~~~~~~~piilVGnK~DL~~~~~~~~~~~~~r~V~~~~g  138 (187)
T cd04129          62 YERLRPLSYSKAHVILIGFAVDT---PDSLENVRTKWIEEVRRYCPNVPVILVGLKKDLRQDAVAKEEYRTQRFVPIQQG  138 (187)
T ss_pred             CCCCCCCEECCCCEEEEECCCCC---HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCHHHH
T ss_conf             45460412338858999702698---667999999999999985879988999886001134112111223155789999


Q ss_pred             -HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf             -87755532232100011100223200678776321000
Q gi|254780321|r  153 -QIEETIGISTEDALLVSAKTGEGIPLLLERIVQQLPSP  190 (606)
Q Consensus       153 -ei~~~~g~~~~~ii~vSAktG~GV~~LLd~Iv~~iP~P  190 (606)
T Consensus       139 ~~~a~~~~--~~~y~EtSAk~~~nV~e~F~~~~r~~l~~  175 (187)
T cd04129         139 KRVAKEIG--AKKYMECSALTGEGVDDVFEAATRAALLV  175 (187)
T ss_pred             HHHHHHCC--CCEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99999849--97899968899979899999999999752