HHsearch alignment for GI: 254780321 and conserved domain: cd04145
>cd04145 M_R_Ras_like M-Ras/R-Ras-like subfamily. This subfamily contains R-Ras2/TC21, M-Ras/R-Ras3, and related members of the Ras family. M-Ras is expressed in lympho-hematopoetic cells. It interacts with some of the known Ras effectors, but appears to also have its own effectors. Expression of mutated M-Ras leads to transformation of several types of cell lines, including hematopoietic cells, mammary epithelial cells, and fibroblasts. Overexpression of M-Ras is observed in carcinomas from breast, uterus, thyroid, stomach, colon, kidney, lung, and rectum. In addition, expression of a constitutively active M-Ras mutant in murine bone marrow induces a malignant mast cell leukemia that is distinct from the monocytic leukemia induced by H-Ras. TC21, along with H-Ras, has been shown to regulate the branching morphogenesis of ureteric bud cell branching in mice. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an ali
Probab=99.36 E-value=2.8e-11 Score=95.24 Aligned_cols=154 Identities=23% Similarity=0.226 Sum_probs=101.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEE-EEEEEEECCCCCEEEEEEEECCCCCHH
Q ss_conf 7999801389877889999998298054444311305867798719505232-799997437884389999617873002
Q gi|254780321|r 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQ-TVRLNYTSTDAKDYQLNLIDTPGHVDF 91 (606)
Q Consensus 13 N~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~-~~~~~~~~~~~~~y~iNlIDTPGH~DF 91 (606)
T Consensus 4 Kiv~lGd~~VGKTsli~r~~--~~~f~~~y-~--------------~Ti~~~~~k~~---~~~~~~~~l~iwDtaG~e~~ 63 (164)
T cd04145 4 KLVVVGGGGVGKSALTIQFI--QSYFVTDY-D--------------PTIEDSYTKQC---EIDGQWAILDILDTAGQEEF 63 (164)
T ss_pred EEEEECCCCCCHHHHHHHHH--CCCCCCCC-C--------------CCEEEEEEEEE---EECCEEEEEEEEECCCCCCC
T ss_conf 99999999978899999998--09898756-7--------------84135899999---99999999999989886031
Q ss_pred HHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHH-H----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 799999997302689999868788655899999999-7----09967998326788753211338887755532232100
Q gi|254780321|r 92 TYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAI-D----NNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDAL 166 (606)
Q Consensus 92 ~~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~A~-~----~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ii 166 (606)
T Consensus 64 ~~~~~~~~~~a~~~ilvydi~~~~Sf~~~~~~~~~i~~~~~~~~~piilVgNK~DL~~~r~-Vs~~e~~~~a~~~~~~~~ 142 (164)
T cd04145 64 SAMREQYMRTGEGFLLVFSVTDRGSFEEVDKFHTQILRVKDRDEFPMILVGNKADLEHQRK-VSREEGQELARKLKIPYI 142 (164)
T ss_pred CHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHCC-CCHHHHHHHHHHCCCEEE
T ss_conf 2567987346787468985673543999999999999861887775265303457354088-999999999998199899
Q ss_pred HHHHHCCCCCCHHHHHHHHHH
Q ss_conf 011100223200678776321
Q gi|254780321|r 167 LVSAKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 167 ~vSAktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 143 E~SAk~~~nV~e~F~~l~~~I 163 (164)
T cd04145 143 ETSAKDRLNVDKAFHDLVRVI 163 (164)
T ss_pred EECCCCCCCHHHHHHHHHHHH
T ss_conf 985486827799999999975