>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=99.95 E-value=7.8e-28 Score=206.35 Aligned_cols=174 Identities=26% Similarity=0.297 Sum_probs=124.9 Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCC-CCCCEEECCCHHHHHHCCEEEEEEEEEEEE-------------------CC Q ss_conf 9998013898778899999982980544-443113058677987195052327999974-------------------37 Q gi|254780321|r 14 FSIVAHIDHGKSTLADRFIQHCRGLTER-EMSSQVLDNMDIERERGITIKAQTVRLNYT-------------------ST 73 (606) Q Consensus 14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~-~~~~~vlD~~~~EreRGITIka~~~~~~~~-------------------~~ 73 (606) T Consensus 2 v~v~GhVD~GKSTL~G~Lt--~g~lDdGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~~~~~~~~~~ 79 (224) T cd04165 2 VAVVGNVDAGKSTLLGVLT--QGELDNGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNHLSESDIEIC 79 (224) T ss_pred EEEEECCCCCHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEE T ss_conf 8999485884889999985--67742221067778776189997265441156554010145320213476544220121 Q ss_pred CCCEEEEEEEECCCCCHHHHHHHHHHHH--CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC-CCCCH Q ss_conf 8843899996178730027999999973--02689999868788655899999999709967998326788753-21133 Q gi|254780321|r 74 DAKDYQLNLIDTPGHVDFTYEVSRSLSA--CEGSLLVVDATQGVEAQTLANVYQAIDNNHEIITVLNKADLPSA-DPDRV 150 (606) Q Consensus 74 ~~~~y~iNlIDTPGH~DF~~EV~r~l~a--~dgaiLvVdA~~Gvq~QT~~~~~~A~~~~l~~I~viNKiD~~~A-~~e~v 150 (606) T Consensus 80 ~~~~k~it~iD~pGH~~y~kt~i~G~~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l~ip~~vvitKiDl~~~~~l~~~ 159 (224) T cd04165 80 EKSSKLVTFIDLAGHERYLKTTLFGLTGYAPDYAMLVVAANAGIIGMTKEHLGLALALNIPVFVVVTKIDLAPANILQET 159 (224) T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH T ss_conf 36786799997887399999999876355689899993178897799999999999839998999989776898999999 Q ss_pred HHHHHHHHH-----------------------HHHHH---HHHHHHHCCCCCCHHHHHHHHHHHCC Q ss_conf 888775553-----------------------22321---00011100223200678776321000 Q gi|254780321|r 151 KKQIEETIG-----------------------ISTED---ALLVSAKTGEGIPLLLERIVQQLPSP 190 (606) Q Consensus 151 ~~ei~~~~g-----------------------~~~~~---ii~vSAktG~GV~~LLd~Iv~~iP~P 190 (606) T Consensus 160 ~~~i~~~lk~p~~~k~p~~v~~~~d~~~~a~~~~~~~ivPIf~vS~VtG~Gi~~L~~f-L~~LP~r 224 (224) T cd04165 160 LKDLKRILKVPGVRKLPVPVKSDDDVVLAASNFSSERIVPIFQVSNVTGEGLDLLHAF-LNLLPLR 224 (224) T ss_pred HHHHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH-HHHCCCC T ss_conf 9999999704475568702168588999986488677746799765898799999999-9876999

HHsearch alignment for GI: 254780321 and conserved domain: cd04165