HHsearch alignment for GI: 254780321 and conserved domain: pfam00025
>pfam00025 Arf ADP-ribosylation factor family. Pfam combines a number of different Prosite families together
Probab=99.67 E-value=1.4e-15 Score=124.17 Aligned_cols=154 Identities=16% Similarity=0.227 Sum_probs=101.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCH
Q ss_conf 31799980138987788999999829805444431130586779871950523279999743788438999961787300
Q gi|254780321|r 11 IRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVD 90 (606)
Q Consensus 11 IRN~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~D 90 (606)
T Consensus 14 ~~Ki~llG~~~vGKTsll~~~~--~~~~~~--~~----------pTig~~~----~~v~~-----~~~~~~iwDt~Gqe~ 70 (174)
T pfam00025 14 EMRILILGLDNAGKTTILYKLK--LGEIVT--TI----------PTIGFNV----ETVTY-----KNVKFTVWDVGGQES 70 (174)
T ss_pred EEEEEEECCCCCCHHHHHHHHH--CCCCCC--CC----------CCCCCEE----EEEEE-----CCEEEEEEECCCCCC
T ss_conf 6699999999998899999995--499887--44----------7468238----99998-----999999982798702
Q ss_pred HHHHHHHHHHHCCEEEEEEECCCCCCH-HHHHHHHHHHH----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH--HH
Q ss_conf 279999999730268999986878865-58999999997----099679983267887532113388877555322--32
Q gi|254780321|r 91 FTYEVSRSLSACEGSLLVVDATQGVEA-QTLANVYQAID----NNHEIITVLNKADLPSADPDRVKKQIEETIGIS--TE 163 (606)
Q Consensus 91 F~~EV~r~l~a~dgaiLvVdA~~Gvq~-QT~~~~~~A~~----~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~--~~ 163 (606)
T Consensus 71 ~~~~~~~y~~~a~~ii~V~D~t~~~s~~~~~~~l~~~l~~~~~~~~piliv~NK~DL~~~~~~~ei~~~~~~~~~~~~~~ 150 (174)
T pfam00025 71 LRPLWRNYFPNTDAVIFVVDSADRDRIEEAKEELHALLNEEELADAPLLILANKQDLPGAMSEAEIRELLGLHELKSRPW 150 (174)
T ss_pred CCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 32679988417826899986786787999999999987542358970899872566767899999999997864417996
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 100011100223200678776321
Q gi|254780321|r 164 DALLVSAKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 164 ~ii~vSAktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 151 ~~~~~SAktG~gI~e~f~~L~~~I 174 (174)
T pfam00025 151 EIQGCSAVTGEGLDEGLDWLSNYI 174 (174)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 899998867959899999999539