HHsearch alignment for GI: 254780321 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=99.54 E-value=1.7e-13 Score=110.11 Aligned_cols=155 Identities=24% Similarity=0.233 Sum_probs=101.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCHHHH
Q ss_conf 99980138987788999999829805444431130586779871950523279999743788438999961787300279
Q gi|254780321|r 14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTY 93 (606)
Q Consensus 14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka~~~~~~~~~~~~~~y~iNlIDTPGH~DF~~ 93 (606)
T Consensus 2 i~vvG~~~vGKTsli~r~~--~~~f~~~~-------------~~t~~~~~~~~~~~---~~~~~~~~~i~Dt~G~e~~~~ 63 (162)
T pfam00071 2 LVLVGDGGVGKSSLLIRFT--QNKFPEEY-------------IPTIGVDFYTKTIE---VDGKTVKLQIWDTAGQERFRA 63 (162)
T ss_pred EEEECCCCCCHHHHHHHHH--HCCCCCCC-------------CCCCEEEEEEEEEE---ECCEEEEEEEEECCCCHHHHH
T ss_conf 8999979977999999996--19999874-------------77413556789999---999999999997898720467
Q ss_pred HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHH-HHH---CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999973026899998687886558999999-997---09967998326788753211338887755532232100011
Q gi|254780321|r 94 EVSRSLSACEGSLLVVDATQGVEAQTLANVYQ-AID---NNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLVS 169 (606)
Q Consensus 94 EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~~~~-A~~---~~l~~I~viNKiD~~~A~~e~v~~ei~~~~g~~~~~ii~vS 169 (606)
T Consensus 64 ~~~~~~~~ad~~iivfd~~~~~S~~~i~~~~~~i~~~~~~~~piilvgnK~Dl~~~~~i-~~~e~~~~a~~~~~~y~e~S 142 (162)
T pfam00071 64 LRPLYYRGAQGFLLVYDITSRDSFENVKKWLEEILRHADDNVPIVLVGNKCDLEDQRVV-STEEGEALAKELGLPFMETS 142 (162)
T ss_pred HHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCC-CHHHHHHHHHHHCCEEEEEC
T ss_conf 88998625765504234898899999999999999857988628899752474651889-99999999998099799973
Q ss_pred HHCCCCCCHHHHHHHHHH
Q ss_conf 100223200678776321
Q gi|254780321|r 170 AKTGEGIPLLLERIVQQL 187 (606)
Q Consensus 170 AktG~GV~~LLd~Iv~~i 187 (606)
T Consensus 143 ak~g~gI~~~F~~i~~~i 160 (162)
T pfam00071 143 AKTNENVEEAFEELAREI 160 (162)
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 788829999999999996