HHsearch alignment for GI: 254780321 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=99.31 E-value=6.9e-11 Score=92.59 Aligned_cols=157 Identities=23% Similarity=0.252 Sum_probs=97.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHCCEEEE-EEEEEEEECCCCCEEEEEEEECCCCCHHH
Q ss_conf 99980138987788999999829805444431130586779871950523-27999974378843899996178730027
Q gi|254780321|r 14 FSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKA-QTVRLNYTSTDAKDYQLNLIDTPGHVDFT 92 (606)
Q Consensus 14 ~~IiaHvDhGKTTL~d~lL~~tg~i~~~~~~~~vlD~~~~EreRGITIka-~~~~~~~~~~~~~~y~iNlIDTPGH~DF~ 92 (606)
T Consensus 1 ivllGd~~VGKTsli~r~~--~~~f~~~y-~--------------~Ti~~~~~~~~~---~~~~~~~l~i~DtaG~e~~~ 60 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYT--TNAFPEDY-V--------------PTVFENYSADVE---VDGKPVELGLWDTAGQEDYD 60 (174)
T ss_pred EEEECCCCCCHHHHHHHHH--HCCCCCCC-C--------------CCEEEEEEEEEE---ECCEEEEEEEEECCCCCCCC
T ss_conf 5998978975999999995--39899985-7--------------850578999999---99999999999489870345
Q ss_pred HHHHHHHHHCCEEEEEEECCCCCCHHHHHH-HHHHH---HCCCCEEEEECCCCCCCCCC----------CCHH-HHHHHH
Q ss_conf 999999973026899998687886558999-99999---70996799832678875321----------1338-887755
Q gi|254780321|r 93 YEVSRSLSACEGSLLVVDATQGVEAQTLAN-VYQAI---DNNHEIITVLNKADLPSADP----------DRVK-KQIEET 157 (606)
Q Consensus 93 ~EV~r~l~a~dgaiLvVdA~~Gvq~QT~~~-~~~A~---~~~l~~I~viNKiD~~~A~~----------e~v~-~ei~~~ 157 (606)
T Consensus 61 ~l~~~~~~~a~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~ 140 (174)
T smart00174 61 RLRPLSYPDTDVFLICFSVDSPASFENVKEKWYPEVKHFCPNTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEAL 140 (174)
T ss_pred CCCHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 45001104886899997589878999999989999998688986999987542501233354553314650029999999
Q ss_pred H-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
Q ss_conf 5-32232100011100223200678776321000
Q gi|254780321|r 158 I-GISTEDALLVSAKTGEGIPLLLERIVQQLPSP 190 (606)
Q Consensus 158 ~-g~~~~~ii~vSAktG~GV~~LLd~Iv~~iP~P 190 (606)
T Consensus 141 a~~~~~~~y~EtSAk~g~nV~e~F~~l~r~~l~p 174 (174)
T smart00174 141 AKRIGAVKYLECSALTQEGVREVFEEAIRAALNP 174 (174)
T ss_pred HHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 9983997899964588949899999999997294