RPSBLAST alignment for GI: 254780321 and conserved domain: KOG0459

>gnl|CDD|35680 KOG0459, KOG0459, KOG0459, Polypeptide release factor 3 [Translation, ribosomal structure and biogenesis]. Length = 501
 Score = 55.8 bits (134), Expect = 4e-08
 Identities = 67/330 (20%), Positives = 134/330 (40%), Gaps = 65/330 (19%)

Query: 13  NFSIVAHIDHGKSTLADRFIQHCRGLTEREMS----------------SQVLDNMDIERE 56
           N   + H+D GKST+    +     + +R +                 S  LD    ER+
Sbjct: 81  NAVFIGHVDAGKSTIGGNILFLTGMVDKRTLEKYEREAKEKNRESWYLSWALDTNGEERD 140

Query: 57  RGITIKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDAT---- 112
           +G T++       Y  T+ K +   ++D PGH  F   +    S  + ++LV+ A     
Sbjct: 141 KGKTVEVGRA---YFETENKRF--TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 195

Query: 113 -----QGVEAQTLANVYQAIDNNHEIITVLNKADLPSADPDRVK-KQIEETIG------- 159
                +G + +  A + +     H +I ++NK D P+ +    + ++ +E +        
Sbjct: 196 ETGFEKGGQTREHAMLAKTAGVKH-LIVLINKMDDPTVNWSNERYEECKEKLQPFLRKLG 254

Query: 160 --ISTEDALL-VSAKTGEGI-------------PLLLERIVQQLPSPTSPEGANAPLKAL 203
                +   + VS  TG  +             P+ LE  + +LP        N P++  
Sbjct: 255 FNPKPDKHFVPVSGLTGANVKDRTDSVCPWYKGPIFLE-YLDELPHL--ERILNGPIRCP 311

Query: 204 LIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAKYQVERIGILTPKMIDIEALYPGE 263
           + + + +  +G +V  ++ +G + KGQ + +M    K  VE +GI +   ++ + + PGE
Sbjct: 312 VANKYKD--MGTVVGGKVESGSIKKGQQLVVMPN--KTNVEVLGIYSDD-VETDRVAPGE 366

Query: 264 -IGVMIASIKEVSHTRVGDTITDDSSPTTS 292
            + + +  I E      G  +   ++P  S
Sbjct: 367 NVKLRLKGI-EEEDISPGFILCSPNNPCKS 395