BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780321|ref|YP_003064734.1| GTP-binding protein LepA [Candidatus Liberibacter asiaticus str. psy62] (606 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780321|ref|YP_003064734.1| GTP-binding protein LepA [Candidatus Liberibacter asiaticus str. psy62] Length = 606 Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/606 (100%), Positives = 606/606 (100%) Query: 1 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGIT 60 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGIT Sbjct: 1 MQKKPTPLSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGIT 60 Query: 61 IKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTL 120 IKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTL Sbjct: 61 IKAQTVRLNYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTL 120 Query: 121 ANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLVSAKTGEGIPLLL 180 ANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLVSAKTGEGIPLLL Sbjct: 121 ANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIEETIGISTEDALLVSAKTGEGIPLLL 180 Query: 181 ERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAK 240 ERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAK Sbjct: 181 ERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAK 240 Query: 241 YQVERIGILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTTSALPGFKPI 300 YQVERIGILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTTSALPGFKPI Sbjct: 241 YQVERIGILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTTSALPGFKPI 300 Query: 301 QPVVFCGLFPVDATQFENLRTAINKLRLNDASFSFELENSTALGFGFRCGFLGLLHLEII 360 QPVVFCGLFPVDATQFENLRTAINKLRLNDASFSFELENSTALGFGFRCGFLGLLHLEII Sbjct: 301 QPVVFCGLFPVDATQFENLRTAINKLRLNDASFSFELENSTALGFGFRCGFLGLLHLEII 360 Query: 361 QERLEREFSLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITP 420 QERLEREFSLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITP Sbjct: 361 QERLEREFSLNLIGTSPSVVYELYMHDGSMQKLSNPIDMPEVTKIAELREPWIQVTIITP 420 Query: 421 NEYLGSILKLCQERRGIQIDMSHLDNRAMIVYELPLNEVIFDFYDRLKSVSKGYASFDYN 480 NEYLGSILKLCQERRGIQIDMSHLDNRAMIVYELPLNEVIFDFYDRLKSVSKGYASFDYN Sbjct: 421 NEYLGSILKLCQERRGIQIDMSHLDNRAMIVYELPLNEVIFDFYDRLKSVSKGYASFDYN 480 Query: 481 VIDYRDSDLVKLTILVNNETIDALSILVHRSVSEKRGRGICEKLKNLIPQQMFQIAIQAA 540 VIDYRDSDLVKLTILVNNETIDALSILVHRSVSEKRGRGICEKLKNLIPQQMFQIAIQAA Sbjct: 481 VIDYRDSDLVKLTILVNNETIDALSILVHRSVSEKRGRGICEKLKNLIPQQMFQIAIQAA 540 Query: 541 IGGRIIARETVKARRKDVTAKCYGGDITRKRKLLEKQKEGKKRMRRFGRVDIPQSAFISI 600 IGGRIIARETVKARRKDVTAKCYGGDITRKRKLLEKQKEGKKRMRRFGRVDIPQSAFISI Sbjct: 541 IGGRIIARETVKARRKDVTAKCYGGDITRKRKLLEKQKEGKKRMRRFGRVDIPQSAFISI 600 Query: 601 LKTDNE 606 LKTDNE Sbjct: 601 LKTDNE 606 >gi|254780233|ref|YP_003064646.1| GTP-binding protein [Candidatus Liberibacter asiaticus str. psy62] Length = 624 Score = 122 bits (306), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 118/400 (29%), Positives = 189/400 (47%), Gaps = 43/400 (10%) Query: 10 RIRNFSIVAHIDHGKSTLADRFIQHCRGLTERE-MSSQVLDNMDIERERGITIKAQTVRL 68 +IRN +I+AH+DHGK+TL D ++ + + +S +V+D D+E+ERGITI A+ Sbjct: 18 QIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKV--- 74 Query: 69 NYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAID 128 TS D ++N++DTPGH DF EV R L E +++VDA +G QT V +A+ Sbjct: 75 --TSIVWNDVRINIVDTPGHADFGGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALK 132 Query: 129 NNHEIITVLNKADLPSADPDRVKKQIEETI-GISTEDA------LLVSAKTG-------- 173 I V+NK D A D V ++ + + DA L S + G Sbjct: 133 IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDFPILYGSGRFGWMSDSSDG 192 Query: 174 ---EGIPLLLERIVQQLPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQ 230 +G+ LL IV +P P EG + +L + +LG +V RI +G + Q Sbjct: 193 SRDQGMVPLLNLIVDHVPPPVISEGEFKMIGTIL---EKDPFLGRIVTGRIHSGTIKSNQ 249 Query: 231 SIRLMGTN-AKYQVERIG-ILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSS 288 +I+ + + A +V R+ IL + ID + + G I SI + V DT D Sbjct: 250 NIKALSPDGALVEVGRVSKILAFRGIDRQPIDEAHAG-DIVSIAGLVKATVADTFCD--- 305 Query: 289 PTTSALPGFKPIQPVVFCGLF-----PVDATQFENLRTAINKLRL---NDASFSFELENS 340 P+ +PI P F P+ T+ + + + + + RL + + + ++E S Sbjct: 306 PSIDEPLKAQPIDPPTVTMTFGVNDSPLAGTEGDKVTSRMIRDRLFKEAEGNIALKIEES 365 Query: 341 TALGFGFRCGFLGLLHLEIIQERLEREFSLNLIGTSPSVV 380 ++ F G G L L ++ E + RE L + P VV Sbjct: 366 SSKDAFFVSG-RGELQLAVLIETMRRE-GFELAVSRPRVV 403 >gi|254780264|ref|YP_003064677.1| elongation factor G [Candidatus Liberibacter asiaticus str. psy62] Length = 701 Score = 97.1 bits (240), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 12 RNFSIVAHIDHGKSTLADRFIQHC---RGLTEREMSSQVLDNMDIERERGITIKAQTVRL 68 RNF I+AHID GK+T +R + + + E S +D M+ E+ERGITI + + + Sbjct: 11 RNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTV 70 Query: 69 NYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAID 128 + D +L +IDTPGHVDFT EV RS+ +G++ ++D+ GVE QT QA Sbjct: 71 FWPGRDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADK 130 Query: 129 NNHEIITVLNKADLPSADPDRVKKQIEETIG 159 + + NK D AD R + I +G Sbjct: 131 YSVPRVIFCNKMDKMGADFYRSVEMISSRLG 161 Score = 70.5 bits (171), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 70/256 (27%), Positives = 116/256 (45%), Gaps = 34/256 (13%) Query: 148 DRVKKQIE-ETIGISTEDALLVSAKTGEGIPLLLERIVQQLPSPTSPEGA---------- 196 DR++ I TI + L S+ +G+ LL+ +V LPSP Sbjct: 244 DRIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVDVKSNSE 303 Query: 197 -------NAPLKALLIDSWYNSYLGVMVLVRIINGQLTKGQSIRLMGTNAKYQVERIGIL 249 ++PL L +S++G + RI +G+++KG S L+ T K + ER+G + Sbjct: 304 IDVSAVDSSPLSMLAFKVMADSFVGSLTFCRIYSGKISKGDS--LLNT-VKGKKERVGRM 360 Query: 250 ----TPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSPTTSALPGFKPIQPVVF 305 + DI+ Y G+I + +A +KE T GDT+ D S P F +PV+ Sbjct: 361 LQMHSNSREDIDEAYCGDI-IALAGLKE---TTTGDTLCDPSRPIVLERMDFP--EPVIQ 414 Query: 306 CGLFPVDATQFENLRTAINKLRLNDASFSFELENSTALGFGFRCGFLGLLHLEIIQERLE 365 + P E + A+++L D S ++ ++ +G LHLEII +R+ Sbjct: 415 IAIEPKSKGDQERMSLALSRLVAEDPSLRVSMDPNSGQ---TNLSGMGELHLEIIVDRML 471 Query: 366 REFSLNLIGTSPSVVY 381 REF ++ +P V Y Sbjct: 472 REFKVDANVGAPYVSY 487 Score = 38.5 bits (88), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%) Query: 407 ELREPWIQVTIITPNEYLGSILKLCQERRGIQIDMSHLDNRAMIVY---ELPLNEVIFDF 463 +L EP ++V + P EY+G ++ RRG + +NR++ V +PL+ +F + Sbjct: 604 QLLEPLMKVEVTVPAEYVGDVIGDLSSRRG---QIQGQENRSVYVVIDAHVPLS-CMFKY 659 Query: 464 YDRLKSVSKGYASF 477 D L+S+S+G + Sbjct: 660 VDSLRSMSQGRGQY 673 >gi|254780263|ref|YP_003064676.1| translation elongation factor Tu [Candidatus Liberibacter asiaticus str. psy62] Length = 392 Score = 53.9 bits (128), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTS 72 S + H+DHGK+TL ++ +E + +D+ E+ RGITI T ++Y Sbjct: 14 GLSTIGHVDHGKTTLTAAITKY---YSEEKKEYGDIDSAPEEKLRGITI--ATAHVSY-E 67 Query: 73 TDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAID-NNH 131 TD + Y + ID PGH D+ + + +G++LV A G + QT ++ A Sbjct: 68 TDKRFY--SHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGIS 125 Query: 132 EIITVLNKAD 141 I+ +NK D Sbjct: 126 SIVVYMNKVD 135 >gi|254780150|ref|YP_003064563.1| translation elongation factor Tu [Candidatus Liberibacter asiaticus str. psy62] Length = 392 Score = 53.9 bits (128), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 9/130 (6%) Query: 13 NFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVRLNYTS 72 S + H+DHGK+TL ++ +E + +D+ E+ RGITI T ++Y Sbjct: 14 GLSTIGHVDHGKTTLTAAITKY---YSEEKKEYGDIDSAPEEKLRGITI--ATAHVSY-E 67 Query: 73 TDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAID-NNH 131 TD + Y + ID PGH D+ + + +G++LV A G + QT ++ A Sbjct: 68 TDKRFY--SHIDCPGHADYVKNMITGATQADGAILVCAAEDGPKPQTREHILLARQIGIS 125 Query: 132 EIITVLNKAD 141 I+ +NK D Sbjct: 126 SIVVYMNKVD 135 >gi|254780787|ref|YP_003065200.1| translation initiation factor IF-2 [Candidatus Liberibacter asiaticus str. psy62] Length = 884 Score = 52.8 bits (125), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 52/223 (23%), Positives = 96/223 (43%), Gaps = 31/223 (13%) Query: 15 SIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERER--GITIKAQTVRLNYTS 72 +I+ H+DHGK++L D + D+ + GIT ++ Y Sbjct: 387 TIMGHVDHGKTSLLD-----------------AIRKADVAKGEIGGITQHIGAYQVAYQG 429 Query: 73 TDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQAIDNNHE 132 + + +DTPGH F +R + ++LV+ A + + Q + ++ A + Sbjct: 430 KN-----ITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVS 484 Query: 133 IITVLNKADLPSADPDRVKKQI------EETIGISTEDALLVSAKTGEGIPLLLERIVQQ 186 II +NK D ADP +V+ + E++G D + +SAK + LL+ I+ Q Sbjct: 485 IIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILD-VEISAKNNLNLDKLLDAILLQ 543 Query: 187 LPSPTSPEGANAPLKALLIDSWYNSYLGVMVLVRIINGQLTKG 229 N + ++++ + G +V V + G L+KG Sbjct: 544 AEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKG 586 >gi|255764471|ref|YP_003064835.2| GTP-binding protein EngA [Candidatus Liberibacter asiaticus str. psy62] Length = 470 Score = 45.8 bits (107), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 44/221 (19%) Query: 8 LSRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVR 67 +S+ ++V + GKSTL +R + + R LT + GIT + ++ Sbjct: 200 ISKPLRIAVVGRPNVGKSTLINRLLGYNRLLTGSQ--------------SGITRDSVSIS 245 Query: 68 LNYTSTDAKDYQLNLIDT-----PGHVDFTYE---VSRSLSA---CEGSLLVVDATQGVE 116 N+ K++ + + DT P + + E V +S+ + CE +++++DAT E Sbjct: 246 WNW-----KNHPIEIFDTAGMRKPSRITESLEQKTVKKSMQSVRTCETTIVLLDATIPFE 300 Query: 117 AQTLANVYQAIDNNHEIITVLNKADLPSAD----PDRVKKQIEETIGISTEDALLVSAKT 172 Q L V + H ++ LNK D+ S D K I+ I +S +T Sbjct: 301 KQDLRIVDSVFNTGHAVVLALNKWDMVSDKLNLLQDLRTKAIKNLPQIGDIYINTISGRT 360 Query: 173 GEGIPLLLERIVQQLPSPTSPEGANAPLKALLIDSWYNSYL 213 GEG+ L+ +++ N K + S+ NS+L Sbjct: 361 GEGLDDLMVSVLE----------INKLWKTRITTSYLNSWL 391 >gi|254780941|ref|YP_003065354.1| GTP-binding protein Era [Candidatus Liberibacter asiaticus str. psy62] Length = 311 Score = 32.7 bits (73), Expect = 0.016, Method: Compositional matrix adjust. Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 32/190 (16%) Query: 9 SRIRNFSIVAHIDHGKSTLADRFIQHCRGLTEREMSSQVLDNMDIERERGITIKAQTVR- 67 SR ++V + GKSTL +RF+ + +T K QT R Sbjct: 20 SRSGCVALVGATNAGKSTLVNRFVG--------------------AKVSIVTHKVQTTRS 59 Query: 68 LNYTSTDAKDYQLNLIDTPG--HVDFTYE---VSRSLSACEGS---LLVVDATQGVEAQT 119 + K+ Q+ +DTPG + +Y + S S + + LVVD+ + ++ Sbjct: 60 IVRGIVSEKESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNI 119 Query: 120 LANVYQAIDNNHEIITVLNKADLPSADPDRVKKQIE-ETIGISTEDALLVSAKTGEGIPL 178 + + + +I +LNK D P+R+ +Q E + E +VSA G G Sbjct: 120 HDLLKEIAKRSSRLILILNKID--CVKPERLLEQAEIANKLVFIEKTFMVSATKGHGCDD 177 Query: 179 LLERIVQQLP 188 +L + LP Sbjct: 178 VLNYLCSTLP 187 >gi|254780232|ref|YP_003064645.1| inorganic pyrophosphatase [Candidatus Liberibacter asiaticus str. psy62] Length = 177 Score = 27.7 bits (60), Expect = 0.49, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 14/89 (15%) Query: 232 IRLMGTNAKYQVERIG--ILTPKMIDIEALYPGEIGVMIASIKEVSHTRVGDTITDDSSP 289 I L G KY++++ ++ + I LYPG G + +T++DD P Sbjct: 23 ISLGGYPIKYEMDKKSGVLVVDRFISTPMLYPGNYGF------------IPNTLSDDGDP 70 Query: 290 TTSALPGFKPIQPVVFCGLFPVDATQFEN 318 + +PI P P+ + E+ Sbjct: 71 VDVIMYSSEPILPGSVISTRPIGVMKMED 99 >gi|254780300|ref|YP_003064713.1| aspartate carbamoyltransferase catalytic subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 316 Score = 26.2 bits (56), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Query: 67 RLNYTSTDAKDYQLNLIDTPGHVDFTYEVSRSLSACEGSLLVVDATQGVEAQTLANVYQA 126 +L Y DA L+ PG ++ YE+S S++ S++ GV A +A + + Sbjct: 252 KLKYAKKDA------LVMHPGPINRNYEISSSVADGSQSIIQYQVEMGV-AVRMAIIKEL 304 Query: 127 IDNNHEI 133 ++N ++I Sbjct: 305 LENQNKI 311 Score = 23.9 bits (50), Expect = 7.6, Method: Compositional matrix adjust. Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%) Query: 214 GVMVLVRIINGQLTKGQSIRLMGTNAKYQVERIGILTPKMIDIEALYPGEIGVMIASIKE 273 G ++ V +IN TK +++ G N + + L P +I I Y G + ++ IK Sbjct: 68 GKLLGVHVININ-TKNSAMK-KGENIADTIATLNALRPNIIVIRHPYSGAVNSLMHKIKG 125 Query: 274 VSHTRVGDTITDDSSPTTSALPGF 297 S GD + P+ + L F Sbjct: 126 PSIINAGDGTHEH--PSQALLDAF 147 >gi|254780814|ref|YP_003065227.1| DNA gyrase subunit B [Candidatus Liberibacter asiaticus str. psy62] Length = 803 Score = 25.8 bits (55), Expect = 2.1, Method: Compositional matrix adjust. Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 2/78 (2%) Query: 313 ATQFENLRTAINK--LRLNDASFSFELENSTALGFGFRCGFLGLLHLEIIQERLEREFSL 370 T LR+A+ + + SF + + + +G R GF +L +++ R + Sbjct: 286 GTHLSGLRSALTRQITSYVEKSFGSKKDKRSVIGDDCREGFTSVLSIKMPDPRFSSQTKE 345 Query: 371 NLIGTSPSVVYELYMHDG 388 L+ + V E +++DG Sbjct: 346 KLVSSEVRSVVESFVNDG 363 >gi|254780846|ref|YP_003065259.1| bifunctional riboflavin kinase/FMN adenylyltransferase [Candidatus Liberibacter asiaticus str. psy62] Length = 324 Score = 25.4 bits (54), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 28/68 (41%) Query: 454 LPLNEVIFDFYDRLKSVSKGYASFDYNVIDYRDSDLVKLTILVNNETIDALSILVHRSVS 513 L L IFDF + + FDY + + D+ KL I + + A IL Sbjct: 256 LLLESFIFDFSQEIYGQRCTVSFFDYLRPEIKFKDIEKLKIYMGEDEKKARKILESSYPL 315 Query: 514 EKRGRGIC 521 +R R IC Sbjct: 316 SERDRIIC 323 >gi|254780744|ref|YP_003065157.1| ABC transporter nucleotide binding/ATPase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 262 Score = 25.0 bits (53), Expect = 3.6, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 16 IVAHIDHGKSTLADR-FIQHCRGLTEREMSSQVLDNMDIER 55 I H H TL DR +I H G+ +++DN D+ R Sbjct: 213 ITDHNVHEILTLIDRAYIIHAGGVLAHGTVQEIIDNQDVRR 253 >gi|254780271|ref|YP_003064684.1| ATP-dependent protease ATP-binding subunit ClpX [Candidatus Liberibacter asiaticus str. psy62] Length = 424 Score = 24.6 bits (52), Expect = 5.2, Method: Compositional matrix adjust. Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 502 DALSILVHRSVSEKRG-RGICEKLKNLIPQQMFQIAIQAAIGGRIIARETVKAR 554 DAL + +++ K G RG+ L+ ++ MF++ + + II+ + VK + Sbjct: 352 DALREIARCAIAHKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKGK 405 >537021.9.peg.473_1 Length = 165 Score = 23.9 bits (50), Expect = 8.9, Method: Compositional matrix adjust. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 10/76 (13%) Query: 414 QVTIITPNEYLGSILKLCQERRGIQIDMSHLDNRAMIV--YELPLNEVIF------DFYD 465 +++ TP+ Y +++LC++ + M + R + V +EL EV F DF + Sbjct: 54 RLSACTPDNYTKQLIELCEKNHDYK--MVEMLQRFLHVVSFELGRLEVSFLKEIPEDFIE 111 Query: 466 RLKSVSKGYASFDYNV 481 L + K + D+ + Sbjct: 112 NLATKLKNWTGEDWEI 127 >gi|254780414|ref|YP_003064827.1| GMP synthase [Candidatus Liberibacter asiaticus str. psy62] Length = 520 Score = 23.9 bits (50), Expect = 9.0, Method: Compositional matrix adjust. Identities = 12/32 (37%), Positives = 19/32 (59%) Query: 469 SVSKGYASFDYNVIDYRDSDLVKLTILVNNET 500 S+ KGY +F V+D + + KL +V+ ET Sbjct: 270 SLFKGYPNFPLRVVDASERFIRKLKNIVDPET 301 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.319 0.136 0.384 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 371,347 Number of Sequences: 1233 Number of extensions: 15424 Number of successful extensions: 63 Number of sequences better than 100.0: 18 Number of HSP's better than 100.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 42 Number of HSP's gapped (non-prelim): 22 length of query: 606 length of database: 328,796 effective HSP length: 79 effective length of query: 527 effective length of database: 231,389 effective search space: 121942003 effective search space used: 121942003 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 41 (20.4 bits)