HHsearch alignment for GI: 254780322 and conserved domain: COG0116

>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=96.50  E-value=0.0034  Score=37.93  Aligned_cols=123  Identities=11%  Similarity=0.075  Sum_probs=78.5

Q ss_pred             HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCC-----------------------
Q ss_conf             776631746220689999999999789863689870999859985899999862697-----------------------
Q gi|254780322|r   14 RLRSFRQKDFSVYFLLDRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKI-----------------------   70 (273)
Q Consensus        14 ~~ra~~~~~~~~~~l~~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~-----------------------   70 (273)
T Consensus       162 hkRGyR~~~g~Ap-LketLAaAil~-lagw~-~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~  238 (381)
T COG0116         162 HKRGYRVYDGPAP-LKETLAAAILL-LAGWK-PDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWD  238 (381)
T ss_pred             HHCCCCCCCCCCC-CHHHHHHHHHH-HCCCC-CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHH
T ss_conf             1065614688878-56999999999-73999-998341688773479999997344568763322004554321388899


Q ss_pred             ---------C-------EEEEECCHHHHHHHHH------------HCCCCCHHHHCCCCCCCCHHHHHHHHH----CCCC
Q ss_conf             ---------0-------8997200113577531------------100120011014333522266666742----2234
Q gi|254780322|r   71 ---------H-------RMIRAEISTEFSTLKR------------EVISCPLEEIPSISQSVDLILSPLNLH----IIND  118 (273)
Q Consensus        71 ---------~-------~v~~~D~s~~~~~~~~------------~~~~~d~e~l~~~~~sfDli~s~~~l~----w~~d  118 (273)
T Consensus       239 ~~~~ea~~~a~~~~~~~~~~G~Did~r~i~~Ak~NA~~AGv~d~I~f~~~d~~~l~~~~~~~gvvI~NPPYGeRlg~~~~  318 (381)
T COG0116         239 KLREEAEERARRGKELPIIYGSDIDPRHIEGAKANARAAGVGDLIEFKQADATDLKEPLEEYGVVISNPPYGERLGSEAL  318 (381)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCHHHCCCHHH
T ss_conf             99999999865147666589874898999999998997698832899974432166876669989958983011177046


Q ss_pred             HHHHH----HHHHHHHCCCCEEEEE
Q ss_conf             69999----9999981878708984
Q gi|254780322|r  119 TLEMF----SKINHMLKPGGMFLAA  139 (273)
Q Consensus       119 ~~~~l----~~~~r~LkpgG~~~~s  139 (273)
T Consensus       319 v~~LY~~fg~~lk~~~~~ws~~v~t  343 (381)
T COG0116         319 VAKLYREFGRTLKRLLAGWSRYVFT  343 (381)
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             9999999999999872577369997