HHsearch alignment for GI: 254780322 and conserved domain: COG0421
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism].
Probab=98.51 E-value=1.1e-06 Score=58.34 Aligned_cols=94 Identities=17% Similarity=0.191 Sum_probs=74.4
Q ss_pred CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCC---------------CCCHH-HHCCCCCCCCHHH
Q ss_conf 8987099985998589999986269708997200113577531100---------------12001-1014333522266
Q gi|254780322|r 45 QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVI---------------SCPLE-EIPSISQSVDLIL 108 (273)
Q Consensus 45 ~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~---------------~~d~e-~l~~~~~sfDli~ 108 (273)
T Consensus 75 ~~pk~VLiiGgGdG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi 154 (282)
T COG0421 75 PNPKRVLIIGGGDGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVII 154 (282)
T ss_pred CCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCEEE
T ss_conf 99776999889766999999836884337999708899999998666754335797368996107999874887677899
Q ss_pred HHHHHHCCCCH------HHHHHHHHHHHCCCCEEEEEE
Q ss_conf 66674222346------999999999818787089840
Q gi|254780322|r 109 SPLNLHIINDT------LEMFSKINHMLKPGGMFLAAI 140 (273)
Q Consensus 109 s~~~l~w~~d~------~~~l~~~~r~LkpgG~~~~s~ 140 (273)
T Consensus 155 ~D~tdp-~-gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~ 190 (282)
T COG0421 155 VDSTDP-V-GPAEALFTEEFYEGCRRALKEDGIFVAQA 190 (282)
T ss_pred ECCCCC-C-CCCCCCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 858899-8-84302377999999998628896899944