HHsearch alignment for GI: 254780322 and conserved domain: COG1064

Probab=96.20  E-value=0.081  Score=29.94  Aligned_cols=90  Identities=12%  Similarity=0.119  Sum_probs=61.0

Q ss_pred             CCCCCEEEECCC-CCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHC-----CCC-CHHHHCCCCCCCCHHHHHHHHHCCC
Q ss_conf             898709998599-858999998626970899720011357753110-----012-0011014333522266666742223
Q gi|254780322|r   45 QTFENALELHGI-TGIVGYTCMETKKIHRMIRAEISTEFSTLKREV-----ISC-PLEEIPSISQSVDLILSPLNLHIIN  117 (273)
Q Consensus        45 ~~~~~vLdlGcG-tG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~-----~~~-d~e~l~~~~~sfDli~s~~~l~w~~  117 (273)
T Consensus       165 ~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-----  238 (339)
T COG1064         165 KPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-----  238 (339)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCEEEECCC-----
T ss_conf             99989999877489999999999869-969999578779999998488289976781166776734739999877-----


Q ss_pred             CHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             4699999999981878708984068
Q gi|254780322|r  118 DTLEMFSKINHMLKPGGMFLAAIPG  142 (273)
Q Consensus       118 d~~~~l~~~~r~LkpgG~~~~s~~~  142 (273)
T Consensus       239 --~~~~~~~l~~l~~~G~~v~vG~~  261 (339)
T COG1064         239 --PATLEPSLKALRRGGTLVLVGLP  261 (339)
T ss_pred             --HHHHHHHHHHHHCCCEEEEECCC
T ss_conf             --45599999986429789997888