HHsearch alignment for GI: 254780322 and conserved domain: COG1889
>COG1889 NOP1 Fibrillarin-like rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=94.46 E-value=0.15 Score=28.36 Aligned_cols=110 Identities=20% Similarity=0.150 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHCC-CCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHH------HHH---CCCCCHHHHC-
Q ss_conf 999999997898636-89870999859985899999862697089972001135775------311---0012001101-
Q gi|254780322|r 30 DRVAKEIAFRLNMIN-QTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTL------KRE---VISCPLEEIP- 98 (273)
Q Consensus 30 ~~~a~~l~~~l~~~~-~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~------~~~---~~~~d~e~l~- 98 (273)
T Consensus 60 KLaAa-Il~Gl~~~pi~~g~~VLYLGAasGTTvSHVSDIv~~G~iYaVEfs~R~~reLl~~a~~R~Ni~PIL~DA~~P~~ 138 (231)
T COG1889 60 KLAAA-ILKGLKNFPIKEGSKVLYLGAASGTTVSHVSDIVGEGRIYAVEFSPRPMRELLDVAEKRPNIIPILEDARKPEK 138 (231)
T ss_pred HHHHH-HHCCCCCCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf 77999-97370027769998789950367985767776047870899996444699999998747874002013688377
Q ss_pred --CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf --43335222666667422234699999999981878708984068
Q gi|254780322|r 99 --SISQSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPG 142 (273)
Q Consensus 99 --~~~~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~ 142 (273)
T Consensus 139 Y~~~Ve~VDviy~DVAQ--p~Qa~I~~~Na~~FLk~~G~~~i~iKA 182 (231)
T COG1889 139 YRHLVEKVDVIYQDVAQ--PNQAEILADNAEFFLKKGGYVVIAIKA 182 (231)
T ss_pred HHHHCCCCCEEEEECCC--CHHHHHHHHHHHHHCCCCCEEEEEEEE
T ss_conf 65312454389983688--107899998899732169739999985