HHsearch alignment for GI: 254780322 and conserved domain: COG2230
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].
Probab=99.58 E-value=2.5e-14 Score=102.92 Aligned_cols=163 Identities=17% Similarity=0.121 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCC---------CCHHHHCC
Q ss_conf 999999999789863689870999859985899999862697089972001135775311001---------20011014
Q gi|254780322|r 29 LDRVAKEIAFRLNMINQTFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFSTLKREVIS---------CPLEEIPS 99 (273)
Q Consensus 29 ~~~~a~~l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~~~~~~~~---------~d~e~l~~ 99 (273)
T Consensus 57 Q~~k~~~~~~kl~L--~~G~~lLDiGCGWG~l~~~aA~~y-~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd 133 (283)
T COG2230 57 QRAKLDLILEKLGL--KPGMTLLDIGCGWGGLAIYAAEEY-GVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD 133 (283)
T ss_pred HHHHHHHHHHHCCC--CCCCEEEEECCCHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 99999999975699--999989874788449999999984-997999668999999999999975997660799656210
Q ss_pred CCCCCCHHHHHHHHHCCCC--HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
Q ss_conf 3335222666667422234--69999999998187870898406867633477889987545426866421674599999
Q gi|254780322|r 100 ISQSVDLILSPLNLHIIND--TLEMFSKINHMLKPGGMFLAAIPGIGTLHELRKALLKAETELTGGASPRVIPFMDIKSA 177 (273)
Q Consensus 100 ~~~sfDli~s~~~l~w~~d--~~~~l~~~~r~LkpgG~~~~s~~~~~~~~el~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 177 (273)
T Consensus 134 ~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~~~~~~~~~~~-i~~y----iFPg-G~lPs~~~i 207 (283)
T COG2230 134 FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGPDQEFRRFPDF-IDKY----IFPG-GELPSISEI 207 (283)
T ss_pred CCCCCCEEEEHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH-HHHH----CCCC-CCCCCHHHH
T ss_conf 324342055600688737102899999999645999659999966788554433278-9985----7899-848977999
Q ss_pred HHHHHHCCCCCEEEEEEEEEEECCC
Q ss_conf 9999850898546773136883589
Q gi|254780322|r 178 GTLMEKSGFISPIIDQDTYTVYYKS 202 (273)
Q Consensus 178 ~~ll~~agf~~~~~~~~~~~~~~~~ 202 (273)
T Consensus 208 ~~~~~~~~~~v~~--~~~~~~hYa~ 230 (283)
T COG2230 208 LELASEAGFVVLD--VESLRPHYAR 230 (283)
T ss_pred HHHHHHCCCEEEH--HHHHCHHHHH
T ss_conf 9988756868842--7640677899