HHsearch alignment for GI: 254780322 and conserved domain: COG3963

Probab=97.89  E-value=8.9e-05  Score=47.20  Aligned_cols=99  Identities=18%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             CCCCEEEECCCCCHHHHHHHHH-CCCCEEEEECCHHHHHHH------HHHCCCCCHHHHC-----CCCCCCCHHHHHHHH
Q ss_conf             9870999859985899999862-697089972001135775------3110012001101-----433352226666674
Q gi|254780322|r   46 TFENALELHGITGIVGYTCMET-KKIHRMIRAEISTEFSTL------KREVISCPLEEIP-----SISQSVDLILSPLNL  113 (273)
Q Consensus        46 ~~~~vLdlGcGtG~~~~~l~~~-~~~~~v~~~D~s~~~~~~------~~~~~~~d~e~l~-----~~~~sfDli~s~~~l  113 (273)
T Consensus        48 sglpVlElGPGTGV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~gda~~l~~~l~e~~gq~~D~viS~lPl  127 (194)
T COG3963          48 SGLPVLELGPGTGVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIINGDAFDLRTTLGEHKGQFFDSVISGLPL  127 (194)
T ss_pred             CCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCC
T ss_conf             59764777698667689999657995436899827799999997588751305405657877865279740168865600


Q ss_pred             HCCCCH--HHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf             222346--9999999998187870898406867
Q gi|254780322|r  114 HIINDT--LEMFSKINHMLKPGGMFLAAIPGIG  144 (273)
Q Consensus       114 ~w~~d~--~~~l~~~~r~LkpgG~~~~s~~~~~  144 (273)
T Consensus       128 l~~P~~~~iaile~~~~rl~~gg~lvqftYgp~  160 (194)
T COG3963         128 LNFPMHRRIAILESLLYRLPAGGPLVQFTYGPL  160 (194)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf             248677899999999985689972799984688