HHsearch alignment for GI: 254780322 and conserved domain: COG4122

Probab=98.52  E-value=5.9e-07  Score=59.89  Aligned_cols=103  Identities=18%  Similarity=0.189  Sum_probs=77.9

Q ss_pred             HHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCC-CCEEEEECCHHHHHHHHHHC------------CC-CCH-HHHC-C
Q ss_conf             9978986368987099985998589999986269-70899720011357753110------------01-200-1101-4
Q gi|254780322|r   36 IAFRLNMINQTFENALELHGITGIVGYTCMETKK-IHRMIRAEISTEFSTLKREV------------IS-CPL-EEIP-S   99 (273)
Q Consensus        36 l~~~l~~~~~~~~~vLdlGcGtG~~~~~l~~~~~-~~~v~~~D~s~~~~~~~~~~------------~~-~d~-e~l~-~   99 (273)
T Consensus        50 ~L~~L~~~~-~~k~iLEiGT~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~  128 (219)
T COG4122          50 LLRLLARLS-GPKRILEIGTAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRL  128 (219)
T ss_pred             HHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC
T ss_conf             999999734-9864999635237999999963888976999707989999999999975976528988357479999733


Q ss_pred             CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             3335222666667422234699999999981878708984068
Q gi|254780322|r  100 ISQSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPG  142 (273)
Q Consensus       100 ~~~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~  142 (273)
T Consensus       129 ~~~~fDliFIDad---K~~yp~~le~~~~lLr~GGliv~DNvl  168 (219)
T COG4122         129 LDGSFDLVFIDAD---KADYPEYLERALPLLRPGGLIVADNVL  168 (219)
T ss_pred             CCCCCCEEEEECC---HHHCHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             4788568998378---435999999999973789689983035