HHsearch alignment for GI: 254780322 and conserved domain: COG5459

>COG5459 Predicted rRNA methylase [Translation, ribosomal structure and biogenesis].
Probab=96.89  E-value=0.0045  Score=37.26  Aligned_cols=106  Identities=13%  Similarity=0.078  Sum_probs=65.2

Q ss_pred             CCCCEEEECCCCCHHHHHHHHHCCCC-EEEEECCHHHHHHHHH---------------HCCCCCHHHHCCCCCCCCHHHH
Q ss_conf             98709998599858999998626970-8997200113577531---------------1001200110143335222666
Q gi|254780322|r   46 TFENALELHGITGIVGYTCMETKKIH-RMIRAEISTEFSTLKR---------------EVISCPLEEIPSISQSVDLILS  109 (273)
Q Consensus        46 ~~~~vLdlGcGtG~~~~~l~~~~~~~-~v~~~D~s~~~~~~~~---------------~~~~~d~e~l~~~~~sfDli~s  109 (273)
T Consensus       113 apqsiLDvG~GPgtgl~A~n~i~Pdl~sa~ile~sp~lrkV~~tl~~nv~t~~td~r~s~vt~dRl~lp~-ad~ytl~i~  191 (484)
T COG5459         113 APQSILDVGAGPGTGLWALNDIWPDLKSAVILEASPALRKVGDTLAENVSTEKTDWRASDVTEDRLSLPA-ADLYTLAIV  191 (484)
T ss_pred             CCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCC-CCEEEHHHH
T ss_conf             8610200377875212332033788022123404899999999998604533477778865021047883-223633343


Q ss_pred             HHH-HHCCCC--HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHH
Q ss_conf             667-422234--6999999999818787089840686763347788
Q gi|254780322|r  110 PLN-LHIIND--TLEMFSKINHMLKPGGMFLAAIPGIGTLHELRKA  152 (273)
Q Consensus       110 ~~~-l~w~~d--~~~~l~~~~r~LkpgG~~~~s~~~~~~~~el~~~  152 (273)
T Consensus       192 ~~eLl~d~~ek~i~~~ie~lw~l~~~gg~lVivErGtp~Gf~~I~r  237 (484)
T COG5459         192 LDELLPDGNEKPIQVNIERLWNLLAPGGHLVIVERGTPAGFERILR  237 (484)
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
T ss_conf             5444435574318899999998606897499971798236999999