HHsearch alignment for GI: 254780322 and conserved domain: PRK00107

Probab=98.28  E-value=5.8e-06  Score=54.13  Aligned_cols=115  Identities=17%  Similarity=0.167  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHH---CCC-CCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHHH---HH--------HHCCCCC
Q ss_conf             99999999978986---368-987099985998589999986269708997200113577---53--------1100120
Q gi|254780322|r   29 LDRVAKEIAFRLNM---INQ-TFENALELHGITGIVGYTCMETKKIHRMIRAEISTEFST---LK--------REVISCP   93 (273)
Q Consensus        29 ~~~~a~~l~~~l~~---~~~-~~~~vLdlGcGtG~~~~~l~~~~~~~~v~~~D~s~~~~~---~~--------~~~~~~d   93 (273)
T Consensus        48 ~~~~~rHi~DSl~~~~~~~~~~~~~vlDiGSGaGfPGiplAI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R  127 (216)
T PRK00107         48 EEMWVRHILDSLALLPYLQGEKPIRVLDVGSGAGFPGIPLAIARPDLQVTLVDSLGKKIAFLRQVAAELGLKNVTVVHGR  127 (216)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCEEEEEHH
T ss_conf             99999988857889873376658779970799994267899977877299973876999999999997699987998635


Q ss_pred             HHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
Q ss_conf             01101433352226666674222346999999999818787089840686763347
Q gi|254780322|r   94 LEEIPSISQSVDLILSPLNLHIINDTLEMFSKINHMLKPGGMFLAAIPGIGTLHEL  149 (273)
Q Consensus        94 ~e~l~~~~~sfDli~s~~~l~w~~d~~~~l~~~~r~LkpgG~~~~s~~~~~~~~el  149 (273)
T Consensus       128 ~E~~~-~~~~fD~itsRAv----a~l~~l~~~~~~~l~~~g~~i~~-KG~~~~~Ei  177 (216)
T PRK00107        128 AEEFG-QEEKFDVVTSRAV----ASLSDLVELCLPLLKPGGRFLAL-KGQDPEEEI  177 (216)
T ss_pred             HHCCC-CCCCCCEEEEEHH----HCHHHHHHHHHHHCCCCCEEEEE-CCCCHHHHH
T ss_conf             44046-5678668986054----06999999999754889799998-799959999